G1105655


Basic Information

Item Value
gene id G1105655
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70902905 ~ 70906429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257166
ctccatcatcttctctctttccctctcagtctctccatcatcttctctctctccctctcagtctctccatcctcttctctctctctatctctctccctctctctctccatctctctctccatctctctctctccttctctttccatctctctctccctctctctatctccatctctctccctctctctctttccatctctctctccatctctctctcgcttcctccctttccttctctctctctctccatctctctctctcactctccttccatctctctctccctatctccatctctctctccctatctctatctccatctctctccctctctctctttccatctctctctccatctctctctcgcttcctctctttccttctctctctctctccatctctctctctcactctccttccatctctctctccctatctccatctctctctccctatctccatctctctctctctatctccatctctctctccctccatctctctccctccatctctctccctctctctccctccatctctctctccctccatctctctccctccatctctctccctctctctccctccatctctctctccccccatctctctccctccatctctctctctctctctctctctctctctctccttgctctgcTTGATATGTTTTACTTCACCACAGCAGAGTGCTCGAGGACGAAGCTGAAGTAATGGACACTGTTTTTTTATCAAATAGTTTACCTCAGAATCGGAATATGTGGCTTCATTGATGGTGGAGGATATCTACGTAACTAGAACATCTAATATACATTTGAGTCTATTTTCAACCCACTTTGGCCCTGTATAGACAAATAGGATAAGGGTATAGAGACGGGACAAGGGGCAAGGATAGAGACTCTAGATGTGTTGGATGGGACAAGGGAAAATGTCATGTTGTATCTGTATAACATGCCTTGCATGAATAACTTTCAGCCACAAACCAGGTCTGTGTTCCCACAGCTGACATCACCCATAAACAAACACCATGTGATAGCAGGCTGTCAAATGCAAGAAATCATGTATCGTTAGAAACCATAATGACACCTTTCATTTCCATTTCTCAGCTAAAGGCTTCTGAATCACAATCAACATCTCACAAAACCATTCTCTCAAAATCAAGTTTTTTTTATCTCACAAGGGACAAACATATTTTTAATATCCTCTTTTGTGTAAATATACAATGTAGTAGTATCTTTTACTAAATTAAAATACTGACATTCTAAGGAAAAGCACACAACGACAAGATAGGACAATTTCAGTCAACAGCGTCCATATAGCCAACTGTTATGGAGAGAAGATGATGAGGCCGGATCCACTTGGCGTTAGTTGGTTTATTTTCCAGTTTGAGGAAGAGGAAAGCGAGGAGCAACTGACAGGTTAGAATTCTGATGAGGAGGGCACCTCTCTCTACCAAGCTTCACTCCTCACTACTCCCTCCCCTATCATcatgttctccctccctccctcacagcaCGGCAGACAGGCAGGCCGAGCTGAGCTGGAGAACCTTGATTTGGGGCTGATGTGTTTTATAAGCAGAGGTGTGACGATGGAGACAACCAGGAAACTAGAAAGCATTCTGGCTTTTAACCCCTTCCTTCCCTCATTTACAactctttctctcaatctcttactttgtctttctctctctggacgtGGCACCTGGGTGGGTTCAGTCGGCGTAGAGGATGAACCCAGAGAAGGTGctgtatttgttgttgttgccgcCGTGAGCCTTGCCCCCGTCCAGCTTGATATAGACCTCGTCGCCTGCGTCTAGGTGGAGGATGACGCTATTGGAGGCGTAGTCATAGTTCTGGTCAGCGTCCTGGGCGATGGCACTGGCTCGC
>TU1257167
ctccatcatcttctctctttccctctcagtctctccatcatcttctctctctccctctcagtctctccatcctcttctctctctctatctctctccctctctctctccatctctctctccatctctctctctccttctctttccatctctctctccctctctctatctccatctctctccctctctctctttccatctctctctccatctctctctcgcttcctccctttccttctctctctctctccatctctctctctcactctccttccatctctctctccctatctccatctctctctccctctctctatctccatctctctctccctccatctctctccctccatctctctccctctctctccctccatctctctctccctccatctctctccctccatctctctccctctctctccctccatctctctctccccccatctctctccctccatctctctctccctccatctctctccctccatctctctccccccatctctctccccccatctctctccctccatctctctctctctctctctctctctccttgctctgcTTGATATGTTTTACTTCACCACAGCAGAGTGCTCGAGGACGAAGCTGAAGTAATGGACACTGTTTTTTTATCAAATAGTTTACCTCAGAATCGGAATATGTGGCTTCATTGATGGTGGAGGATATCTACGTAACTAGAACATCTAATATACATTTGAGTCTATTTTCAACCCACTTTGGCCCTGTATAGACAAATAGGATAAGGGTATAGAGACGGGACAAGGGGCAAGGATAGAGACTCTAGATGTGTTGGATGGGACAAGGGAAAATGTCATGTTGTATCTGTATAACATGCCTTGCATGAATAACTTTCAGCCACAAACCAGGTCTGTGTTCCCACAGCTGACATCACCCATAAACAAACACCATGTGATAGCAGGCTGTCAAATGCAAGAAATCATGTATCGTTAGAAACCATAATGACACCTTTCATTTCCATTTCTCAGCTAAAGGCTTCTGAATCACAATCAACATCTCACAAAACCATTCTCTCAAAATCAAGTTTTTTTTATCTCACAAGGGACAAACATATTTTTAATATCCTCTTTTGTGTAAATATACAATGTAGTAGTATCTTTTACTAAATTAAAATACTGACATTCTAAGGAAAAGCACACAACGACAAGATAGGACAATTTCAGTCAACAGCGTCCATATAGCCAACTGTTATGGAGAGAAGATGATGAGGCCGGATCCACTTGGCGTTAGTTGGTTTATTTTCCAGTTTGAGGAAGAGGAAAGCGAGGAGCAACTGACAGGTTAGAATTCTGATGAGGAGGGCACCTCTCTCTACCAAGCTTCACTCCTCACTACTCCCTCCCCTATCATcatgttctccctccctccctcacagcaCGGCAGACAGGCAGGCCGAGCTGAGCTGGAGAACCTTGATTTGGGGCTGATGTGTTTTATAAGCAGAGGTGTGACGATGGAGACAACCAGGAAACTAGAAAGCATTCTGGCTTTTAACCCCTTCCTTCCCTCATTTACAactctttctctcaatctcttactttgtctttctctctctggacgtGGCACCTGGGTGGGTTCAGTCGGCGTAGAGGATGAACCCAGAGAAGGTGctgtatttgttgttgttgccgcCGTGAGCCTTGCCCCCGTCCAGCTTGATATAGACCTCGTCGCCTGCGTCTAGGTGGAGGATGACGCTATTGGAGGCGTAGTCATAGTTCTGGTCAGCGTCCTGGGCGATGGCACTGGCTCGC
>TU1257168
ctccatcatcttctctctttccctctcagtctctccatcatcttctctctctccctctcagtctctccatcctcttctctctctctatctctctccctctctctctccatctctctctccatctctctctctccttctctttccatctctctctccctctctctatctccatctctctccctctctctctttccatctctctctccatctctctctcgcttcctccctttccttctctctctctctccatctctctctctcactctccttccatctctctctccctatctccatctctctctccctatctctatctccatctctctccctctctctctttccatctctctctccatctctctctcgcttcctctctttccttctctctctctctccatctctctctctcactctccttccatctctctctccctatctccatctctctctccctatctccatctctctctctctatctccatctctctctccctccatctctctccctccatctctctccctctctctccctccatctctctctccctccatctctctccctccatctctctccctctctctccctccatctctctctccccccatctctctccctccatctctctctctctctctccctccatctctctctctctctctctctctctccttgctctgcTTGATATGTTTTACTTCACCACAGCAGAGTGCTCGAGGACGAAGCTGAAGTAATGGACACTGTTTTTTTATCAAATAGTTTACCTCAGAATCGGAATATGTGGCTTCATTGATGGTGGAGGATATCTACGTAACTAGAACATCTAATATACATTTGAGTCTATTTTCAACCCACTTTGGCCCTGTATAGACAAATAGGATAAGGGTATAGAGACGGGACAAGGGGCAAGGATAGAGACTCTAGATGTGTTGGATGGGACAAGGGAAAATGTCATGTTGTATCTGTATAACATGCCTTGCATGAATAACTTTCAGCCACAAACCAGGTCTGTGTTCCCACAGCTGACATCACCCATAAACAAACACCATGTGATAGCAGGCTGTCAAATGCAAGAAATCATGTATCGTTAGAAACCATAATGACACCTTTCATTTCCATTTCTCAGCTAAAGGCTTCTGAATCACAATCAACATCTCACAAAACCATTCTCTCAAAATCAAGTTTTTTTTATCTCACAAGGGACAAACATATTTTTAATATCCTCTTTTGTGTAAATATACAATGTAGTAGTATCTTTTACTAAATTAAAATACTGACATTCTAAGGAAAAGCACACAACGACAAGATAGGACAATTTCAGTCAACAGCGTCCATATAGCCAACTGTTATGGAGAGAAGATGATGAGGCCGGATCCACTTGGCGTTAGTTGGTTTATTTTCCAGTTTGAGGAAGAGGAAAGCGAGGAGCAACTGACAGGTTAGAATTCTGATGAGGAGGGCACCTCTCTCTACCAAGCTTCACTCCTCACTACTCCCTCCCCTATCATcatgttctccctccctccctcacagcaCGGCAGACAGGCAGGCCGAGCTGAGCTGGAGAACCTTGATTTGGGGCTGATGTGTTTTATAAGCAGAGGTGTGACGATGGAGACAACCAGGAAACTAGAAAGCATTCTGGCTTTTAACCCCTTCCTTCCCTCATTTACAactctttctctcaatctcttactttgtctttctctctctggacgtGGCACCTGGGTGGGTTCAGTCGGCGTAGAGGATGAACCCAGAGAAGGTGctgtatttgttgttgttgccgcCGTGAGCCTTGCCCCCGTCCAGCTTGATATAGACCTCGTCGCCTGCGTCTAGGTGGAGGATGACGCTATTGGAGGCGTAGTCATAGTTCTGGTCAGCGTCCTGGGCGATGGCACTGGCTCGC

Function

NR:

description
hypothetical protein Z043_113723, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257166 False 1892 TUCP 0.47 3 70902905 70906429
TU1257167 False 1796 TUCP 0.47 3 70902905 70906429
TU1257168 True 1910 TUCP 0.47 3 70902905 70906429

Neighbor

gene id symbol gene type direction distance location
LOC110538205 LOC106601037 coding upstream 83731 70807167 ~ 70827806 (+)
LOC110538203 LOC106601033 coding upstream 144739 70756654 ~ 70758166 (+)
LOC110538201 LOC106601034 coding upstream 148360 70752514 ~ 70754545 (+)
si:ch73-141c7.1 LOC106601031 coding upstream 152668 70745535 ~ 70750237 (+)
LOC110538199 LOC106607392 coding upstream 166552 70734239 ~ 70736353 (+)
trnaa-ugc-56 NA coding downstream 2060 70908489 ~ 70908564 (+)
LOC110538209 LOC106601040 coding downstream 78302 70984731 ~ 70986552 (+)
LOC110538210 LOC106607311 coding downstream 80697 70987126 ~ 70991795 (+)
LOC110538212 LOC106601045 coding downstream 114833 71021262 ~ 71039796 (+)
LOC110538213 LOC106601140 coding downstream 184865 71091294 ~ 71147182 (+)
G1105686 NA non-coding upstream 3082 70899370 ~ 70899823 (+)
G1105685 NA non-coding upstream 3922 70898719 ~ 70898983 (+)
G1105669 NA non-coding upstream 40076 70862614 ~ 70862829 (+)
G1105662 NA non-coding upstream 42741 70859942 ~ 70860164 (+)
G1105664 NA non-coding upstream 50774 70851370 ~ 70852131 (+)
G1105710 NA non-coding downstream 36748 70943177 ~ 70943443 (+)
G1105715 NA non-coding downstream 45070 70951499 ~ 70951726 (+)
G1105735 NA non-coding downstream 71944 70978373 ~ 70978580 (+)
G1105751 NA non-coding downstream 93142 70999571 ~ 70999772 (+)
G1105744 LOC106601043 non-coding downstream 103627 71010056 ~ 71016479 (+)
G1105467 LOC106601028 other upstream 268934 70612303 ~ 70633971 (+)
G1105393 NA other upstream 531694 70370755 ~ 70371211 (+)
G1105357 NA other upstream 575779 70324958 ~ 70327126 (+)
G1105281 NA other upstream 708233 70162689 ~ 70194672 (+)
G1105194 NA other upstream 853918 70022708 ~ 70048987 (+)
psmg3 psmg3 other downstream 1035122 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1111164 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2398996 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2478379 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2927214 73833643 ~ 73834606 (+)

Expression


Co-expression Network