G1105751


Basic Information

Item Value
gene id G1105751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70999571 ~ 70999772 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257271
AGCTTGTATGATTATTGCCATTCTCCTTCAAACTCTCTCATCAGCGAGTTGTTTTGagccacaggactgccgctgactagATGTTTTGTCaggttctgaccttagttcttttgttatgtctttgttttagtatggtcagggcgtgagttgggtgggtagtctatgttcttttttctatgatttggtagctctgtgtttggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257271 True 202 lncRNA 0.43 1 70999571 70999772

Neighbor

gene id symbol gene type direction distance location
LOC110538210 LOC106607311 coding upstream 7776 70987126 ~ 70991795 (+)
LOC110538209 LOC106601040 coding upstream 13019 70984731 ~ 70986552 (+)
trnaa-ugc-56 NA coding upstream 91007 70908489 ~ 70908564 (+)
LOC110538205 LOC106601037 coding upstream 180397 70807167 ~ 70827806 (+)
LOC110538203 LOC106601033 coding upstream 241405 70756654 ~ 70758166 (+)
LOC110538212 LOC106601045 coding downstream 21490 71021262 ~ 71039796 (+)
LOC110538213 LOC106601140 coding downstream 91522 71091294 ~ 71147182 (+)
LOC110538215 LOC106601138 coding downstream 167447 71167219 ~ 71182790 (+)
LOC110538217 hop2 coding downstream 183242 71105931 ~ 71187785 (+)
LOC110538218 LOC106601135 coding downstream 199329 71199101 ~ 71220435 (+)
G1105735 NA non-coding upstream 20991 70978373 ~ 70978580 (+)
G1105715 NA non-coding upstream 47845 70951499 ~ 70951726 (+)
G1105710 NA non-coding upstream 56128 70943177 ~ 70943443 (+)
G1105686 NA non-coding upstream 99748 70899370 ~ 70899823 (+)
G1105685 NA non-coding upstream 100588 70898719 ~ 70898983 (+)
G1105744 LOC106601043 non-coding downstream 10284 71010056 ~ 71016479 (+)
G1105743 LOC106607314 non-coding downstream 45809 71045581 ~ 71046167 (+)
G1105766 LOC106601056 non-coding downstream 49030 71048802 ~ 71049028 (+)
G1105767 LOC106607314 non-coding downstream 49435 71049207 ~ 71049475 (+)
G1105768 LOC106601056 non-coding downstream 49792 71049564 ~ 71050433 (+)
G1105655 NA other upstream 93142 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 365600 70612303 ~ 70633971 (+)
G1105393 NA other upstream 628360 70370755 ~ 70371211 (+)
G1105357 NA other upstream 672445 70324958 ~ 70327126 (+)
G1105281 NA other upstream 804899 70162689 ~ 70194672 (+)
psmg3 psmg3 other downstream 941779 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 1017821 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2305653 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2385036 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2833871 73833643 ~ 73834606 (+)

Expression


Co-expression Network