G1105777


Basic Information

Item Value
gene id G1105777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71062969 ~ 71063191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257298
gtgtgtgtgtgcgtacgtgagTGATCATATACATCTGTTTTGCATGAACTACTATGCAGTTAATGAACAGCGTTACTGACTGAGGccttgtctgtctctcagggAGATGGGAGATAGCGGGTGTTATTCTACGGGTGCCTAGTGGACAGATAGCAGCAAAATAAATCAGAGACGTTCCCTCATCGTCTCATCAACCGTCTGTCTCAACCGCCGTCCCCCCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257298 True 223 lncRNA 0.49 1 71062969 71063191

Neighbor

gene id symbol gene type direction distance location
LOC110538212 LOC106601045 coding upstream 23173 71021262 ~ 71039796 (+)
LOC110538210 LOC106607311 coding upstream 71174 70987126 ~ 70991795 (+)
LOC110538209 LOC106601040 coding upstream 76417 70984731 ~ 70986552 (+)
trnaa-ugc-56 NA coding upstream 154405 70908489 ~ 70908564 (+)
LOC110538205 LOC106601037 coding upstream 243795 70807167 ~ 70827806 (+)
LOC110538213 LOC106601140 coding downstream 28103 71091294 ~ 71147182 (+)
LOC110538215 LOC106601138 coding downstream 104028 71167219 ~ 71182790 (+)
LOC110538217 hop2 coding downstream 119823 71105931 ~ 71187785 (+)
LOC110538218 LOC106601135 coding downstream 135910 71199101 ~ 71220435 (+)
LOC110538220 LOC106607322 coding downstream 318017 71381208 ~ 71384698 (+)
G1105747 NA non-coding upstream 683 71061712 ~ 71062286 (+)
G1105776 NA non-coding upstream 2395 71060372 ~ 71060574 (+)
G1105775 LOC106601056 non-coding upstream 4006 71058484 ~ 71058963 (+)
G1105774 LOC106607314 non-coding upstream 4669 71057604 ~ 71058300 (+)
G1105769 NA non-coding upstream 11616 71050530 ~ 71051353 (+)
G1105778 NA non-coding downstream 1096 71064287 ~ 71097788 (+)
G1105791 NA non-coding downstream 25650 71088841 ~ 71089279 (+)
G1105803 NA non-coding downstream 129358 71192549 ~ 71198383 (+)
G1105838 NA non-coding downstream 170510 71233701 ~ 71234085 (+)
G1105655 NA other upstream 156540 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 428998 70612303 ~ 70633971 (+)
G1105393 NA other upstream 691758 70370755 ~ 70371211 (+)
G1105357 NA other upstream 735843 70324958 ~ 70327126 (+)
G1105281 NA other upstream 868297 70162689 ~ 70194672 (+)
psmg3 psmg3 other downstream 878360 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 954402 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2242234 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2321617 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2770452 73833643 ~ 73834606 (+)

Expression


Co-expression Network