G1105791


Basic Information

Item Value
gene id G1105791
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71088841 ~ 71089279 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257316
gctatagacagggtcagttccaaggtcaatagctatatacagggtcagtagctatatacagggtcagtagctatagacagggtcagttccagggtcagtagctatatacagggtcagttccagggtcagtagctatagacagggtcagttccagggtcagtagctatatacagggtcagtagctatatacagggtcagtagctatatacagggtcagtagctatatacagggtcagtagctatagacagggtcagtagctatatacagggtcagttccaggatCAGTAGCTAtagacagggtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257316 True 303 lncRNA 0.46 2 71088841 71089279

Neighbor

gene id symbol gene type direction distance location
LOC110538212 LOC106601045 coding upstream 49045 71021262 ~ 71039796 (+)
LOC110538210 LOC106607311 coding upstream 97046 70987126 ~ 70991795 (+)
LOC110538209 LOC106601040 coding upstream 102289 70984731 ~ 70986552 (+)
trnaa-ugc-56 NA coding upstream 180277 70908489 ~ 70908564 (+)
LOC110538205 LOC106601037 coding upstream 269667 70807167 ~ 70827806 (+)
LOC110538213 LOC106601140 coding downstream 2015 71091294 ~ 71147182 (+)
LOC110538215 LOC106601138 coding downstream 77940 71167219 ~ 71182790 (+)
LOC110538217 hop2 coding downstream 93735 71105931 ~ 71187785 (+)
LOC110538218 LOC106601135 coding downstream 109822 71199101 ~ 71220435 (+)
LOC110538220 LOC106607322 coding downstream 291929 71381208 ~ 71384698 (+)
G1105777 NA non-coding upstream 25650 71062969 ~ 71063191 (+)
G1105747 NA non-coding upstream 26555 71061712 ~ 71062286 (+)
G1105776 NA non-coding upstream 28267 71060372 ~ 71060574 (+)
G1105775 LOC106601056 non-coding upstream 29878 71058484 ~ 71058963 (+)
G1105774 LOC106607314 non-coding upstream 30541 71057604 ~ 71058300 (+)
G1105803 NA non-coding downstream 103270 71192549 ~ 71198383 (+)
G1105838 NA non-coding downstream 144422 71233701 ~ 71234085 (+)
G1105865 NA non-coding downstream 193462 71282741 ~ 71345620 (+)
G1105888 NA non-coding downstream 235616 71324895 ~ 71332360 (+)
G1105655 NA other upstream 182412 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 454870 70612303 ~ 70633971 (+)
G1105393 NA other upstream 717630 70370755 ~ 70371211 (+)
G1105357 NA other upstream 761715 70324958 ~ 70327126 (+)
G1105281 NA other upstream 894169 70162689 ~ 70194672 (+)
psmg3 psmg3 other downstream 852272 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 928314 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2216146 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2295529 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2744364 73833643 ~ 73834606 (+)

Expression


Co-expression Network