G1105803


Basic Information

Item Value
gene id G1105803
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71192549 ~ 71198383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257334
TCTGTGTCTCTTCAGGAAAATACATGGATTAGACGGCAGTTCAAGCCATTCAGATGTTCCTGTATGAGGGGCCTCCCTCCGCAGTAAAACGCTCTGAGGGTCATGTCCCAATTGTTGTTTGGGTAAAACCAACCCCGTTGACTACTCTCCTGGACTTATCTCTGCTGGAGCAGAGTGTGGGCTGAGGCATTTCCCCCTCTGATAAGGCCCGTCTGCCAGGGCTGACCTGATATAGCCTATGCGATCCACCATGAACACACATGCATGAGTTATCAGGTAAATGAAACATACCCTTGAAGGCTCTCTTAACCTAACTTATACATATTTAATCTATCACAGCTAAGATCTTTAATATTCACCCcgcagctctccctctctgttttgaCATTTTATTGTATTGCACTGTAGTAACAGATTTTTTTGGCCGGCGACTAACGTTTTCATGATCTTCAGTGCCATCACTTCCTTCCTCAGCATAGACATGTCCTCCTCCTGCTTCTTCTTCTCCTTGTGCAGAAACTGGATGTAGTCGATAGCTGCAGCAGGAGGCACAGAAACAACCAGGACTTAAAGCATTTCTATCAGGGAGGAAAATTGCAGCTTAGGGTGGGATCctttataaatatttatagtatgTTGACATTATAAAAAGGCTGGCTGGAATGCCAATTTGCAGTCCTAAAAAGTACAATGGTCTATATAGAATACTGTACTTTTCTGCAGCACTGTGGCCTTGCTGATCTTCTGTGTCCCCACGGCAAACTCAGACTGCTGCTGGCAGGTGGGCACTATGGACTGAAGATCATCATAACCTTTCTGTGGAGTCAAACATACACGACAAACAGATTTTTGAATTGACAAAAGTATTACATTTGGCCACCTAAGAAACCTCTTAATTTATTGGAAGAGATCAGAGTCTCACCCTCCTAATCCTTTATATTTTTCAACCTTCTCACAACTACCCTCCTCCCCATGATCTACACTCCTGTTGTTCCGCGCCCCATCGGAGGCCAAACCTTGATAGCATCCCGTCGTTTCTGctcagcctgtgtgtgtgcctgtctccgCCGGTCTTTGTAGGACTCCTTGTATGTGGTCTCATGCCTGTAGTCACTGTCTTCATCATCTACagtgaggagaggaagagcagGTGTTTCAGTCTACCTCCCTAGGGCTCAAGGCCGACATCAAGCTAGAATAAAGCACTGGACAACACCCAACCAAACTAGGTCACTTGGAAATGCAatagaaaaaaaacaagaaagaatagagtgtgagtgagagtgggGTAGGGAGTAAGACACTGAATAAAAGGGGCACTGCATTAATAGTTGTTTCTGAATTAGGACACACAAATATGTAGCTTTGCCTCACATACACAAACCATTtagtcatacagtacacacaccacGTCGCCGATTAAAAATATTCCCTAACACATGTTGTCGAAACATAAATTACAAAGAACACAGTACCTGTATTTGGTACTGATGAGGCACTTGTGGACCCAATGCTGTTAGCCCTGGAGACCACAGTACCCTTCCTTGCATTCTCAGCAAAGAAACCTTAATGGAGAACATGAAAAGCTCAGACATCATTCAATTACTAATCAACAGTTACCCACTGGACTGGTAGCCTACTAGCTATAAAATGTACGTTTTGGTAAAACAATTAGGACAAAGGATACTACTCACTGGGATCAAATCCGTTGTCACTGAAAGACCCGTCGTTCTGTTCAGTCATGGCAGGTGTTGACAGGAGAGAATAAGACAGTGGATAAGGAGGTGAGAACAGGCTCTTTCCCGTCTCACTCAATGGGCAGATTCGATTATGCTGAGCCGCGGGGAACCGGTGACATGAACGGGTAAAAGCAGTGAAGGAAGGAGCTCCCTTCTCAAATGGAACAGTTCTCTGTGCTGCTTGGTcatgtcaacaaggcagcatgatGCATCGTCCAGAAACATACATCTCTTTCCTATAAATTATTTTCAAATATGTTCGACTTTtcaaactagttttcattgggaaggcaaataaaatgttttttttaaaatcaaaagcaatcacttttgcatgtgGAAACCGAATCCTTCTATACTTTTCAGCCGACTTCTGCCGCATTCACGTGCTAGTCTGAATTAGGAAACTCGATAATGTCAGACTTTCTAACCCTTTTTAGTTATAAACGTGCCGCGTTCAACAAGTTAGCAATTCAGACATTttcgagtttcctagttccgactagctgAAAAGTAGAGTACGATTCTAGACTTCGCACAGGGCACCGGTTCCAAAACGAATTCAATCGACTTTCACTTTAATCGACAAACACAGCAATATGCATAAACAAAATCCACTGAAAGTAGTcctggGGTGTAATCATTTGTCCAAACAGTTATGTTCTGCAACTAAAACGAGTTTCTATTGGTCAAATACAGGTAGGTTCCTCCCAGTttcgtttgcttctgtttaagaaacataatcagcggaatgaatacaccactGATTTGATTCATGTAAGCAGAATGTCTAAAAGTATACGGTTttgaatatacttaagtatcaaaagtaaaattataaataatttcaaattcctcatATTAAGAAAACTAGACCGCACCATTGTCTTTACTGATAGTCAGGGCCAAACGCAAACATCTTTACGAATGaggcatgtgtgtttagtgagtccgccagatcagagacagtagggataaaCAGGGATGTTCTCCTGATACGTGCGTCAATCTAACACTTTTCTGAAGTCAAGTACAGATACCCtcccaaaactacttaagtaatacTTTAAAAGTATGTGGCAGCTAGTTACTAGTAGCCCCTCCGTCCCTATGCGGTCAGTGCAGACAAGGCTGAAATATGGCAAATATTCTTGGCAAAAACATGTACACAACCTCGGCAAACATGCGTTGCGTACATGTACATCGTGACGTGTACGTAAACTGCACACACCAACAGCGTTTTCTAAAGTTTATTTATTAACTTAACTGTGGATATATAATGGGTGTACCATTTGCAGAATTAAACACTGTCCACCCAGACAAATTCACCCGTCTGGTCCACTAGGACTAAGCTACAAGCTGGCCAACTAGCCAGCAGTTGACCAAAACAGAACCGTAGCGAAAGGGGAAGAAGCTTGAAAAGAGTCATAAACAAAAGCGCtagtacctagctagctacctgttagctagctaacacacgCCAAGTGTAACAAATTACAAACATTGTATTCTTGCTACGAATATATGGCAGTGTCATACACCGCGTATTTGTCCTCACGTCTCATTTGTCTAAACTAGCAAGCTTACTTTGTTCCAGTGATCCTCCGGCGATGCTGTAGGATCCGTCATCTTGGAATCAGCAGCTGTTCGAGAGCGTCATGCGGTGGATAAACCATTTAGAGAAAGGGAACTACGCCCTCTGCTGGTTCACACAGTATGACATACGGCCTCAAATAAGTGCAAGAAAGTGAGCATGTTAATAGGCCGTAGGGATCTATTGCCGCGTCCAAAACAACGGGGAGCTcggtcaaatcatgatgtcagtggtCTTAGGGTCGGAAAGTCGGATATATAGAAAGAGCCCCGGGTTCCAACGTTGGATTTCCGtattggatgaccgttcaaatcgATTTTCCCACTcttagagttcccagttgttttgaacgtacTCATGTCGGAAGTCGGAGATTTCCCCGTTTTTTTGAACGCGGcatatggctgcgtttacacaggcagcccaattctgatattgcTTTCACTAAttggaccaatcagatcagccc

Function

NR:

description
PREDICTED: max-like protein X isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257334 True 3802 lncRNA 0.43 2 71192549 71198383

Neighbor

gene id symbol gene type direction distance location
LOC110538217 hop2 coding upstream 4764 71105931 ~ 71187785 (+)
LOC110538215 LOC106601138 coding upstream 9759 71167219 ~ 71182790 (+)
LOC110538213 LOC106601140 coding upstream 45367 71091294 ~ 71147182 (+)
LOC110538212 LOC106601045 coding upstream 152753 71021262 ~ 71039796 (+)
LOC110538210 LOC106607311 coding upstream 200754 70987126 ~ 70991795 (+)
LOC110538218 LOC106601135 coding downstream 718 71199101 ~ 71220435 (+)
LOC110538220 LOC106607322 coding downstream 182825 71381208 ~ 71384698 (+)
LOC110538222 LOC106607324 coding downstream 224655 71423038 ~ 71431846 (+)
LOC110538226 gosr2 coding downstream 241621 71440004 ~ 71447266 (+)
LOC110538227 LOC100380862 coding downstream 289273 71487656 ~ 71506845 (+)
G1105778 NA non-coding upstream 94761 71064287 ~ 71097788 (+)
G1105791 NA non-coding upstream 103270 71088841 ~ 71089279 (+)
G1105777 NA non-coding upstream 129358 71062969 ~ 71063191 (+)
G1105747 NA non-coding upstream 130263 71061712 ~ 71062286 (+)
G1105838 NA non-coding downstream 35318 71233701 ~ 71234085 (+)
G1105865 NA non-coding downstream 84358 71282741 ~ 71345620 (+)
G1105888 NA non-coding downstream 126512 71324895 ~ 71332360 (+)
G1105941 NA non-coding downstream 210291 71408674 ~ 71408972 (+)
G1105943 NA non-coding downstream 222828 71421211 ~ 71421415 (+)
G1105655 NA other upstream 286120 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 558578 70612303 ~ 70633971 (+)
G1105393 NA other upstream 821338 70370755 ~ 70371211 (+)
G1105357 NA other upstream 865423 70324958 ~ 70327126 (+)
G1105281 NA other upstream 997877 70162689 ~ 70194672 (+)
psmg3 psmg3 other downstream 743168 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 819210 72016045 ~ 72019145 (+)
G1109505 NA other downstream 2107042 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 2186425 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2635260 73833643 ~ 73834606 (+)

Expression


Co-expression Network