Gene
RNA
| Item | Value |
|---|---|
| gene id | G1108887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 72340529 ~ 72377444 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc3 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1260750 | True | 481 | lncRNA | 0.42 | 2 | 72340529 | 72377444 |
72,324,000
72,328,000
72,332,000
72,336,000
72,340,000
72,344,000
72,348,000
72,352,000
72,356,000
72,360,000
72,364,000
72,364,000
72,368,000
72,372,000
72,376,000
72,380,000
72,384,000
72,388,000
72,392,000
72,396,000
72,400,000
72,404,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il4r2 | il4r2 | coding | downstream | 8119 | 72328176 ~ 72332410 (-) |
| ubfd1 | LOC106601113 | coding | downstream | 37293 | 72300010 ~ 72303236 (-) |
| LOC110538258 | LOC106607344 | coding | downstream | 40666 | 72290312 ~ 72299863 (-) |
| LOC110538255 | LOC106607344 | coding | downstream | 50227 | 72287844 ~ 72290302 (-) |
| rmi2 | cp075 | coding | downstream | 53257 | 72285711 ~ 72287272 (-) |
| LOC110538263 | kdm8 | coding | upstream | 3567 | 72381011 ~ 72385372 (-) |
| LOC110538264 | LOC106601107 | coding | upstream | 178600 | 72556044 ~ 72647866 (-) |
| LOC110538266 | LOC106601105 | coding | upstream | 400624 | 72778068 ~ 72800352 (-) |
| LOC110538280 | NA | coding | upstream | 757443 | 73134887 ~ 73136579 (-) |
| LOC110538281 | LOC106601095 | coding | upstream | 766980 | 73144424 ~ 73147089 (-) |
| G1108864 | NA | non-coding | downstream | 33899 | 72274082 ~ 72306630 (-) |
| LOC110538254 | snn | non-coding | downstream | 55070 | 72283033 ~ 72285611 (-) |
| G1108863 | NA | non-coding | downstream | 66798 | 72273395 ~ 72273731 (-) |
| G1108241 | NA | non-coding | downstream | 83768 | 72256356 ~ 72256761 (-) |
| G1108235 | NA | non-coding | downstream | 89062 | 72251268 ~ 72251467 (-) |
| G1108922 | NA | non-coding | upstream | 31615 | 72409059 ~ 72409279 (-) |
| G1108935 | NA | non-coding | upstream | 47300 | 72424744 ~ 72425071 (-) |
| G1108938 | NA | non-coding | upstream | 50020 | 72427464 ~ 72427711 (-) |
| G1108952 | NA | non-coding | upstream | 69633 | 72447077 ~ 72447295 (-) |
| G1108159 | NA | other | downstream | 201926 | 72137693 ~ 72138603 (-) |
| nudt1 | 8odp | other | downstream | 692166 | 71646624 ~ 71648371 (-) |
| G1107536 | NA | other | downstream | 1027528 | 71312259 ~ 71313001 (-) |
| G1107481 | NA | other | downstream | 1193364 | 71144655 ~ 71147165 (-) |
| G1109275 | NA | other | upstream | 546713 | 72924157 ~ 72925251 (-) |
| G1109389 | LOC106601099 | other | upstream | 695448 | 73072892 ~ 73081402 (-) |
| LOC110538455 | LOC106601085 | other | upstream | 1090967 | 73462257 ~ 73510350 (-) |
| G1110369 | hbb1 | other | upstream | 1204750 | 73582194 ~ 73595358 (-) |
