G1109490


Basic Information

Item Value
gene id G1109490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73286609 ~ 73287015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261405
tctgtaaatagcccatccaaccaactacctacctcatccccatatttttttctgctcttttgcacaccagtatttctacttgcacatcctcatctgcacatctatcactcccgtgttaattgctaaattgtaattacttcgccactatggcctatttattgcctttcctccttacttcatttgcacgcactgtatacagattttctattgtgttattgactgtatgtttgtttatcccatgtgtaactctgtgttgctgtttttgtcgctctgctttgctttatcttggccatgtcgcagttgtaaatgagaacttgttctcaactggcctacctggttaaataaatgaaggttaaataaaaaaataacataaataaagggcaggtaatcaaggaggtgatggagcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261405 True 407 lncRNA 0.39 1 73286609 73287015

Neighbor

gene id symbol gene type direction distance location
LOC110538279 LOC106607360 coding upstream 158702 73115643 ~ 73127907 (+)
LOC110538277 LOC106601099 coding upstream 182702 73039865 ~ 73103907 (+)
LOC110538276 LOC106601100 coding upstream 263016 73011322 ~ 73023593 (+)
LOC110538275 LOC106607358 coding upstream 294224 72978834 ~ 72992385 (+)
LOC110538274 baiap3 coding upstream 355066 72892973 ~ 72931543 (+)
LOC110538463 LOC106601093 coding downstream 48006 73335021 ~ 73376744 (+)
LOC110538462 rpc11 coding downstream 97740 73384755 ~ 73386199 (+)
mgrn1b LOC106607363 coding downstream 136316 73423331 ~ 73431408 (+)
LOC110538457 LOC106601143 coding downstream 152754 73439769 ~ 73443382 (+)
LOC110538456 LOC106601142 coding downstream 172884 73459899 ~ 73462891 (+)
G1108854 LOC106601094 non-coding upstream 14484 73271273 ~ 73272125 (+)
G1108809 NA non-coding upstream 21528 73215534 ~ 73265081 (+)
G1108762 NA non-coding upstream 95030 73191190 ~ 73191579 (+)
G1108754 NA non-coding upstream 133875 73049444 ~ 73152734 (+)
G1108760 NA non-coding upstream 153971 73129730 ~ 73132638 (+)
G1109504 NA non-coding downstream 17179 73304194 ~ 73304612 (+)
G1109509 NA non-coding downstream 23520 73310535 ~ 73310774 (+)
G1109526 NA non-coding downstream 45879 73332894 ~ 73390341 (+)
G1109535 NA non-coding downstream 63609 73350624 ~ 73351024 (+)
LOC110538241 LOC106607115 other upstream 1268319 72016045 ~ 72019145 (+)
psmg3 psmg3 other upstream 1343810 71941515 ~ 71942804 (+)
G1105655 NA other upstream 2380180 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 2652638 70612303 ~ 70633971 (+)
G1105393 NA other upstream 2915398 70370755 ~ 70371211 (+)
G1109505 NA other downstream 18410 73305425 ~ 73306154 (+)
G1109778 NA other downstream 546628 73833643 ~ 73834606 (+)
G1109786 NA other downstream 559240 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 1673251 74960266 ~ 75048356 (+)

Expression


Co-expression Network