G1109535


Basic Information

Item Value
gene id G1109535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73350624 ~ 73351024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261452
AAACCCTCTCCTAGCTGCAAACAAACCCTCTCCTAGCTGCAAATAAATCCTCTCCTAGCTGCAAACAAACCCTCTCCTAGCTGCAAACAAACCCTCTCCTAGCTGCAAACAAACCTTCTCCTAGCTGCAAACAAACCCTCTCCTAGTACAGTATATCAACTGAGTTAAGTAGCAGCTTTCTCATTTGTTTTGCCCATCTCGATAATGTGCCTCGTGTGGTAGAGAGCACAGACCTCATTGTGTAAAACTATCTTTGTCCGTCTTTTTTTTTGACGTTTTTTTGGCACTGCTACTCATACCAAAGCACTATGGAGATTTATATGTGTGTTgtagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261452 True 335 lncRNA 0.42 2 73350624 73351024

Neighbor

gene id symbol gene type direction distance location
LOC110538279 LOC106607360 coding upstream 222717 73115643 ~ 73127907 (+)
LOC110538277 LOC106601099 coding upstream 246717 73039865 ~ 73103907 (+)
LOC110538276 LOC106601100 coding upstream 327031 73011322 ~ 73023593 (+)
LOC110538275 LOC106607358 coding upstream 358239 72978834 ~ 72992385 (+)
LOC110538274 baiap3 coding upstream 419081 72892973 ~ 72931543 (+)
LOC110538462 rpc11 coding downstream 33731 73384755 ~ 73386199 (+)
mgrn1b LOC106607363 coding downstream 72307 73423331 ~ 73431408 (+)
LOC110538457 LOC106601143 coding downstream 88745 73439769 ~ 73443382 (+)
LOC110538456 LOC106601142 coding downstream 108875 73459899 ~ 73462891 (+)
mpg LOC106601084 coding downstream 182253 73533277 ~ 73539888 (+)
G1109509 NA non-coding upstream 39850 73310535 ~ 73310774 (+)
G1109504 NA non-coding upstream 46012 73304194 ~ 73304612 (+)
G1109490 NA non-coding upstream 63609 73286609 ~ 73287015 (+)
G1108854 LOC106601094 non-coding upstream 78499 73271273 ~ 73272125 (+)
G1108809 NA non-coding upstream 85543 73215534 ~ 73265081 (+)
LOC110538463 LOC106601093 non-coding downstream 22983 73335021 ~ 73376744 (+)
G1109483 NA non-coding downstream 36574 73387598 ~ 73388826 (+)
G1109553 NA non-coding downstream 41626 73392650 ~ 73411665 (+)
G1109572 LOC106607368 non-coding downstream 117948 73468972 ~ 73471788 (+)
G1109591 NA non-coding downstream 153590 73504614 ~ 73505170 (+)
G1109505 NA other upstream 44470 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1332334 72016045 ~ 72019145 (+)
psmg3 psmg3 other upstream 1407825 71941515 ~ 71942804 (+)
G1105655 NA other upstream 2444195 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 2716653 70612303 ~ 70633971 (+)
G1109778 NA other downstream 482619 73833643 ~ 73834606 (+)
G1109786 NA other downstream 495231 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 1609242 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 2067765 75418789 ~ 75423163 (+)

Expression


Co-expression Network