Gene
RNA
| Item | Value |
|---|---|
| gene id | G1109483 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 73387598 ~ 73388826 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cell death-inducing p53-target protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1261398 | True | 1112 | lncRNA | 0.39 | 2 | 73387598 | 73388826 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538462 | rpc11 | coding | upstream | 1399 | 73384755 ~ 73386199 (+) |
| LOC110538463 | LOC106601093 | coding | upstream | 10854 | 73335021 ~ 73376744 (+) |
| LOC110538279 | LOC106607360 | coding | upstream | 259691 | 73115643 ~ 73127907 (+) |
| LOC110538277 | LOC106601099 | coding | upstream | 283691 | 73039865 ~ 73103907 (+) |
| LOC110538276 | LOC106601100 | coding | upstream | 364005 | 73011322 ~ 73023593 (+) |
| mgrn1b | LOC106607363 | coding | downstream | 34505 | 73423331 ~ 73431408 (+) |
| LOC110538457 | LOC106601143 | coding | downstream | 50943 | 73439769 ~ 73443382 (+) |
| LOC110538456 | LOC106601142 | coding | downstream | 71073 | 73459899 ~ 73462891 (+) |
| mpg | LOC106601084 | coding | downstream | 144451 | 73533277 ~ 73539888 (+) |
| LOC110538454 | NA | coding | downstream | 164482 | 73553308 ~ 73559544 (+) |
| G1109535 | NA | non-coding | upstream | 36574 | 73350624 ~ 73351024 (+) |
| G1109509 | NA | non-coding | upstream | 76824 | 73310535 ~ 73310774 (+) |
| G1109504 | NA | non-coding | upstream | 82986 | 73304194 ~ 73304612 (+) |
| G1109490 | NA | non-coding | upstream | 100583 | 73286609 ~ 73287015 (+) |
| G1109553 | NA | non-coding | downstream | 3824 | 73392650 ~ 73411665 (+) |
| G1109572 | LOC106607368 | non-coding | downstream | 80146 | 73468972 ~ 73471788 (+) |
| G1109591 | NA | non-coding | downstream | 115788 | 73504614 ~ 73505170 (+) |
| G1109636 | NA | non-coding | downstream | 165947 | 73554773 ~ 73555042 (+) |
| G1109637 | NA | non-coding | downstream | 166917 | 73555743 ~ 73555973 (+) |
| G1109505 | NA | other | upstream | 81444 | 73305425 ~ 73306154 (+) |
| LOC110538241 | LOC106607115 | other | upstream | 1369308 | 72016045 ~ 72019145 (+) |
| psmg3 | psmg3 | other | upstream | 1444799 | 71941515 ~ 71942804 (+) |
| G1105655 | NA | other | upstream | 2481169 | 70902905 ~ 70906429 (+) |
| G1109778 | NA | other | downstream | 444817 | 73833643 ~ 73834606 (+) |
| G1109786 | NA | other | downstream | 457429 | 73846255 ~ 73846794 (+) |
| G1111126 | LOC106578813 | other | downstream | 1571440 | 74960266 ~ 75048356 (+) |
| G1111805 | LOC105030512 | other | downstream | 2029963 | 75418789 ~ 75423163 (+) |
| G1111961 | NA | other | downstream | 2356313 | 75745139 ~ 75745620 (+) |
