G1109781


Basic Information

Item Value
gene id G1109781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73839954 ~ 73840153 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261775
TAGGGTTGTGGTGATgtagggtagtggtggtggtggtgtagggtagtgttagttgtagtgtagggtagtcGTAGtgttggtagtagtggtggtgtagggtagtgctagtatagggtagtgtatggTAGTGGTTGCAGTGATGGTAGTGGATGTGTAGAGTAATGGttgtggtggtgtagggtagtggtggtgtagggtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261775 True 200 lncRNA 0.49 1 73839954 73840153

Neighbor

gene id symbol gene type direction distance location
LOC110538429 LOC106607222 coding upstream 32762 73787459 ~ 73807192 (+)
LOC110538431 NA coding upstream 81622 73756257 ~ 73758332 (+)
LOC118937735 LOC106601065 coding upstream 144634 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 152453 73686626 ~ 73687501 (+)
LOC118937734 LOC106601065 coding upstream 160241 73678826 ~ 73679713 (+)
LOC118937737 NA coding downstream 36523 73876676 ~ 73878177 (+)
LOC110538423 LOC106601285 coding downstream 164531 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 198419 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 202465 74042618 ~ 74060671 (+)
LOC110538417 LOC106601161 coding downstream 256778 74096931 ~ 74102318 (+)
G1109762 NA non-coding upstream 20862 73818762 ~ 73819092 (+)
G1109707 NA non-coding upstream 21347 73815775 ~ 73818607 (+)
G1109729 NA non-coding upstream 92427 73747259 ~ 73747527 (+)
G1109728 NA non-coding upstream 92857 73746531 ~ 73747097 (+)
G1109727 LOC106601059 non-coding upstream 93964 73745768 ~ 73745990 (+)
G1109782 NA non-coding downstream 195 73840348 ~ 73841173 (+)
G1109783 NA non-coding downstream 1027 73841180 ~ 73841478 (+)
G1109788 NA non-coding downstream 8033 73848186 ~ 73848669 (+)
G1109789 NA non-coding downstream 8887 73849040 ~ 73849246 (+)
G1109791 NA non-coding downstream 10183 73850336 ~ 73850623 (+)
G1109778 NA other upstream 5348 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 454087 73384755 ~ 73386199 (+)
G1109505 NA other upstream 533800 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1821664 72016045 ~ 72019145 (+)
psmg3 psmg3 other upstream 1897155 71941515 ~ 71942804 (+)
G1109786 NA other downstream 6102 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 1120113 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1578636 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1904986 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1910717 75750870 ~ 75753593 (+)

Expression


Co-expression Network