G1109814


Basic Information

Item Value
gene id G1109814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73871475 ~ 73871871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261809
ctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggatcgagaaactgaaaaacagcttctatctcaaggccatcagactgttaaacagccatcactagccggctaccacccggttactcaaccctgcaccttagaggctgctgccctatatacacagacatggaatcactggtcactttaataatggaacaccagtcactttaataatgtttacatactttagatctcgcaataacatctgctaaatatgtgtatgtgaccaacacaattgtattttatttgatacaTGACAAAGCAGACAGTccaaaaataaatcaaaaggaagtttgttttaAAGTCTGTTTCTTAGAGCTTTAAGAAAGATCaggatttata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261809 True 397 lncRNA 0.40 1 73871475 73871871

Neighbor

gene id symbol gene type direction distance location
LOC110538429 LOC106607222 coding upstream 64283 73787459 ~ 73807192 (+)
LOC110538431 NA coding upstream 113143 73756257 ~ 73758332 (+)
LOC118937735 LOC106601065 coding upstream 176155 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 183974 73686626 ~ 73687501 (+)
LOC118937734 LOC106601065 coding upstream 191762 73678826 ~ 73679713 (+)
LOC118937737 NA coding downstream 4805 73876676 ~ 73878177 (+)
LOC110538423 LOC106601285 coding downstream 132813 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 166701 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 170747 74042618 ~ 74060671 (+)
LOC110538417 LOC106601161 coding downstream 225060 74096931 ~ 74102318 (+)
G1109801 NA non-coding upstream 3523 73867721 ~ 73867952 (+)
G1109798 NA non-coding upstream 9756 73861494 ~ 73861719 (+)
G1109793 NA non-coding upstream 19193 73852078 ~ 73852282 (+)
G1109791 NA non-coding upstream 20852 73850336 ~ 73850623 (+)
G1109789 NA non-coding upstream 22229 73849040 ~ 73849246 (+)
G1109826 NA non-coding downstream 22131 73894002 ~ 73895298 (+)
G1109809 LOC106601287 non-coding downstream 43588 73915459 ~ 73916606 (+)
G1109804 LOC106601287 non-coding downstream 49429 73921300 ~ 73921963 (+)
G1109847 NA non-coding downstream 54690 73926561 ~ 73926899 (+)
G1109810 NA non-coding downstream 60381 73932252 ~ 73933293 (+)
G1109786 NA other upstream 24681 73846255 ~ 73846794 (+)
G1109778 NA other upstream 36869 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 485608 73384755 ~ 73386199 (+)
G1109505 NA other upstream 565321 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1853185 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 1088395 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1546918 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1873268 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1878999 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1912479 75774976 ~ 75790602 (+)

Expression


Co-expression Network