G1109804 (LOC106601287)


Basic Information

Item Value
gene id G1109804
gene name LOC106601287
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73921300 ~ 73921963 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261799
AAGTTGTCCTGTTTAAAGATGCTGACGTTGGCTCCAGTGATGGTGATGTGGGAGATTTCAGGGAAGTCGCAGAAAGATGTCCATGTGTCAGAGGAGTTGGGTTCTTGCTGGAGGGGCGATTGCTTCACACTTTTCCGATTCCCTAAGTAATCGTTCCCAAAGTAACTGTTGGCCTGAGGGTTCTGCACTGTCATCTTCCTCCACTGAATCCCCTTGGTACCAGACACCATGACCTCATGCATGACCTGAGGGCCAACGTTCCCAGGGTCAGAGGCCCCGTGGGCGTGGCTGGTGTTGAGGTAGGAGCCGCTCCCGTCGCCCCCGTCCTTCCTCAGCTCCAGTTGGGCCGCGAGGAAGGTCTCGGTACCGAAGCGCGGGGCTAGGTGCTCCAGAGTAGACAGGTATTTATACATGATCTCCTGGGAGCCCAGGCGTCCTACGTCCACAGTGTGCTCCTGGAAGGTCTTCACGAAGTCAGCAAAAACACGCCGGATACGGATCTTGGTCAGGAAGTTGTCCCTCGCTATGTGTTTGGAGAAGGATCTCGGAATGC

Function

NR:

description
non-receptor protein tyrosine kinase 2-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261799 True 553 lncRNA 0.55 2 73921300 73921963

Neighbor

gene id symbol gene type direction distance location
LOC118937737 NA coding upstream 43123 73876676 ~ 73878177 (+)
LOC110538429 LOC106607222 coding upstream 114108 73787459 ~ 73807192 (+)
LOC110538431 NA coding upstream 162968 73756257 ~ 73758332 (+)
LOC118937735 LOC106601065 coding upstream 225980 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 233799 73686626 ~ 73687501 (+)
LOC110538423 LOC106601285 coding downstream 82721 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 116609 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 120655 74042618 ~ 74060671 (+)
LOC110538417 LOC106601161 coding downstream 174968 74096931 ~ 74102318 (+)
LOC110538416 LOC106601280 coding downstream 185524 74107487 ~ 74135447 (+)
G1109809 LOC106601287 non-coding upstream 4694 73915459 ~ 73916606 (+)
G1109826 NA non-coding upstream 26002 73894002 ~ 73895298 (+)
G1109814 NA non-coding upstream 49429 73871475 ~ 73871871 (+)
G1109801 NA non-coding upstream 53348 73867721 ~ 73867952 (+)
G1109798 NA non-coding upstream 59581 73861494 ~ 73861719 (+)
G1109847 NA non-coding downstream 4598 73926561 ~ 73926899 (+)
G1109810 NA non-coding downstream 10289 73932252 ~ 73933293 (+)
G1109802 LOC106601286 non-coding downstream 12661 73934624 ~ 73935651 (+)
G1109808 NA non-coding downstream 17406 73939369 ~ 73940004 (+)
G1109812 NA non-coding downstream 18846 73940809 ~ 73941263 (+)
G1109786 NA other upstream 74506 73846255 ~ 73846794 (+)
G1109778 NA other upstream 86694 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 535433 73384755 ~ 73386199 (+)
G1109505 NA other upstream 615146 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1903010 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 1038303 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1496826 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1823176 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1828907 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1862387 75774976 ~ 75790602 (+)

Expression


Co-expression Network