G1109847


Basic Information

Item Value
gene id G1109847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73926561 ~ 73926899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261845
ACTACAGTAGGCTTGTGGGATagatcaaatccaattgtatttatcacatgcgccgaatacagcagttgtagaccttatcgtgaaatgcttacttacaagcccttaaccaacattgcagttcaagaaatacactaccattcaaaagtttgaggtcacttagaaatgtccttgttttccatgaaaacatacatgaaattagttgcaaaatgaataggaaatatagtcaagacgttgacaaagttataaataatgattgttaatcgaaataataattgtgtccctTCAAATGTTGCTttcatcaaagaatcctccatttgcagcaattacagccttgcagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261845 True 339 lncRNA 0.35 1 73926561 73926899

Neighbor

gene id symbol gene type direction distance location
LOC118937737 NA coding upstream 48384 73876676 ~ 73878177 (+)
LOC110538429 LOC106607222 coding upstream 119369 73787459 ~ 73807192 (+)
LOC110538431 NA coding upstream 168229 73756257 ~ 73758332 (+)
LOC118937735 LOC106601065 coding upstream 231241 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 239060 73686626 ~ 73687501 (+)
LOC110538423 LOC106601285 coding downstream 77785 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 111673 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 115719 74042618 ~ 74060671 (+)
LOC110538417 LOC106601161 coding downstream 170032 74096931 ~ 74102318 (+)
LOC110538416 LOC106601280 coding downstream 180588 74107487 ~ 74135447 (+)
G1109804 LOC106601287 non-coding upstream 4598 73921300 ~ 73921963 (+)
G1109809 LOC106601287 non-coding upstream 9955 73915459 ~ 73916606 (+)
G1109826 NA non-coding upstream 31263 73894002 ~ 73895298 (+)
G1109814 NA non-coding upstream 54690 73871475 ~ 73871871 (+)
G1109801 NA non-coding upstream 58609 73867721 ~ 73867952 (+)
G1109810 NA non-coding downstream 5353 73932252 ~ 73933293 (+)
G1109802 LOC106601286 non-coding downstream 7725 73934624 ~ 73935651 (+)
G1109808 NA non-coding downstream 12470 73939369 ~ 73940004 (+)
G1109812 NA non-coding downstream 13910 73940809 ~ 73941263 (+)
G1109857 LOC106599839 non-coding downstream 15452 73942351 ~ 73942613 (+)
G1109786 NA other upstream 79767 73846255 ~ 73846794 (+)
G1109778 NA other upstream 91955 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 540694 73384755 ~ 73386199 (+)
G1109505 NA other upstream 620407 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1908271 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 1033367 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1491890 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1818240 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1823971 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1857451 75774976 ~ 75790602 (+)

Expression


Co-expression Network