G1109872


Basic Information

Item Value
gene id G1109872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73967303 ~ 73967520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261871
tgctggactttcttgggcgtccTGAAGCctccttcacaacaattgaaccgctctccttaaagttcttgatgatccgataaatggttgatttcggtgcaatcttactggcagcaatatccttgcctgtgaagccctttttgtggaaAGCAATGATggcggcacatgtttccttgcaggtaaccatggctgacagaggaaaaacaatgattctaagcacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261871 True 218 lncRNA 0.46 1 73967303 73967520

Neighbor

gene id symbol gene type direction distance location
LOC118937737 NA coding upstream 89126 73876676 ~ 73878177 (+)
LOC110538429 LOC106607222 coding upstream 160111 73787459 ~ 73807192 (+)
LOC110538431 NA coding upstream 208971 73756257 ~ 73758332 (+)
LOC118937735 LOC106601065 coding upstream 271983 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 279802 73686626 ~ 73687501 (+)
LOC110538423 LOC106601285 coding downstream 37164 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 71052 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 75098 74042618 ~ 74060671 (+)
LOC110538417 LOC106601161 coding downstream 129411 74096931 ~ 74102318 (+)
LOC110538416 LOC106601280 coding downstream 139967 74107487 ~ 74135447 (+)
G1109871 NA non-coding upstream 1076 73965970 ~ 73966227 (+)
G1109870 NA non-coding upstream 1428 73965664 ~ 73965875 (+)
G1109859 NA non-coding upstream 21163 73945919 ~ 73946140 (+)
G1109857 LOC106599839 non-coding upstream 24690 73942351 ~ 73942613 (+)
G1109812 NA non-coding upstream 26040 73940809 ~ 73941263 (+)
G1109873 NA non-coding downstream 383 73967903 ~ 73968110 (+)
G1109889 NA non-coding downstream 23478 73990998 ~ 73991335 (+)
G1109892 NA non-coding downstream 27963 73995483 ~ 73995781 (+)
G1109928 LOC106601184 non-coding downstream 99029 74066549 ~ 74073316 (+)
G1109786 NA other upstream 120509 73846255 ~ 73846794 (+)
G1109778 NA other upstream 132697 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 581436 73384755 ~ 73386199 (+)
G1109505 NA other upstream 661149 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1949013 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 992746 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1451269 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1777619 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1783350 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1816830 75774976 ~ 75790602 (+)

Expression


Co-expression Network