G1109889


Basic Information

Item Value
gene id G1109889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73990998 ~ 73991335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261888
cattagcaCAGCTGAGATGTGTTGTGCTGatgaaagaagcaataaaactggccttctttagactagtcgagtatctggagcatcagcatttgtgggttcgattacaggctcaaaatggccagaaatacATAAATTTCTTCaaaaactcgtcagtctatttttgttctgagaaattaaggctattcaatgcgagaaattgccaagaaactgaagatcacgTTCAAAGCTGTGTACTATttattcccttcacagaacagcgcaaacgggccctaaccagaatagaaagaggactgggaggccccggtgcacaactgagcaagaggacaagtacattacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261888 True 338 lncRNA 0.42 1 73990998 73991335

Neighbor

gene id symbol gene type direction distance location
LOC118937737 NA coding upstream 112821 73876676 ~ 73878177 (+)
LOC110538429 LOC106607222 coding upstream 183806 73787459 ~ 73807192 (+)
LOC110538431 NA coding upstream 232666 73756257 ~ 73758332 (+)
LOC118937735 LOC106601065 coding upstream 295678 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 303497 73686626 ~ 73687501 (+)
LOC110538423 LOC106601285 coding downstream 13349 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 47237 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 51283 74042618 ~ 74060671 (+)
LOC110538417 LOC106601161 coding downstream 105596 74096931 ~ 74102318 (+)
LOC110538416 LOC106601280 coding downstream 116152 74107487 ~ 74135447 (+)
G1109873 NA non-coding upstream 22888 73967903 ~ 73968110 (+)
G1109872 NA non-coding upstream 23478 73967303 ~ 73967520 (+)
G1109871 NA non-coding upstream 24771 73965970 ~ 73966227 (+)
G1109870 NA non-coding upstream 25123 73965664 ~ 73965875 (+)
G1109859 NA non-coding upstream 44858 73945919 ~ 73946140 (+)
G1109892 NA non-coding downstream 4148 73995483 ~ 73995781 (+)
G1109928 LOC106601184 non-coding downstream 75214 74066549 ~ 74073316 (+)
G1109929 NA non-coding downstream 75936 74067271 ~ 74074163 (+)
G1109946 NA non-coding downstream 101432 74092767 ~ 74093583 (+)
G1109786 NA other upstream 144204 73846255 ~ 73846794 (+)
G1109778 NA other upstream 156392 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 605131 73384755 ~ 73386199 (+)
G1109505 NA other upstream 684844 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1972708 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 968931 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1427454 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1753804 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1759535 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1793015 75774976 ~ 75790602 (+)

Expression


Co-expression Network