G1109948


Basic Information

Item Value
gene id G1109948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74095154 ~ 74095384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1261951
acaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacccgaaacatttgacccaagttaaacaatttaaaggcaatgctatcaaatactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagatataaaagctgaaataaatcattctctctactattattctgacatttcacattcttaaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1261951 True 231 lncRNA 0.36 1 74095154 74095384

Neighbor

gene id symbol gene type direction distance location
LOC110538418 LOC100380772 coding upstream 34483 74042618 ~ 74060671 (+)
LOC110539171 NA coding upstream 55361 74038572 ~ 74039852 (+)
LOC110538423 LOC106601285 coding upstream 60517 74004684 ~ 74034637 (+)
LOC118937737 NA coding upstream 216977 73876676 ~ 73878177 (+)
LOC110538429 LOC106607222 coding upstream 287962 73787459 ~ 73807192 (+)
LOC110538417 LOC106601161 coding downstream 1547 74096931 ~ 74102318 (+)
LOC110538416 LOC106601280 coding downstream 12103 74107487 ~ 74135447 (+)
LOC110538414 LOC106607202 coding downstream 316356 74411740 ~ 74421010 (+)
LOC110538410 LOC103358203 coding downstream 388774 74484158 ~ 74529823 (+)
LOC118937740 mfap4 coding downstream 434648 74530032 ~ 74532544 (+)
G1109946 NA non-coding upstream 1571 74092767 ~ 74093583 (+)
G1109929 NA non-coding upstream 20991 74067271 ~ 74074163 (+)
G1109928 LOC106601184 non-coding upstream 21838 74066549 ~ 74073316 (+)
G1109892 NA non-coding upstream 99373 73995483 ~ 73995781 (+)
G1109950 NA non-coding downstream 8131 74103515 ~ 74104085 (+)
G1110045 NA non-coding downstream 209161 74304545 ~ 74306737 (+)
G1110083 NA non-coding downstream 283596 74378980 ~ 74379268 (+)
G1110146 NA non-coding downstream 399676 74495060 ~ 74498797 (+)
G1110154 NA non-coding downstream 439205 74534589 ~ 74535016 (+)
G1109786 NA other upstream 248360 73846255 ~ 73846794 (+)
G1109778 NA other upstream 260548 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 709287 73384755 ~ 73386199 (+)
G1109505 NA other upstream 789000 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2076864 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 864882 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1323405 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1649755 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1655486 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1688966 75774976 ~ 75790602 (+)

Expression


Co-expression Network