Gene
RNA
| Item | Value |
|---|---|
| gene id | G1109950 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 74103515 ~ 74104085 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1261954 | True | 571 | lncRNA | 0.43 | 1 | 74103515 | 74104085 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538417 | LOC106601161 | coding | upstream | 1197 | 74096931 ~ 74102318 (+) |
| LOC110538418 | LOC100380772 | coding | upstream | 42844 | 74042618 ~ 74060671 (+) |
| LOC110539171 | NA | coding | upstream | 63722 | 74038572 ~ 74039852 (+) |
| LOC110538423 | LOC106601285 | coding | upstream | 68878 | 74004684 ~ 74034637 (+) |
| LOC118937737 | NA | coding | upstream | 225338 | 73876676 ~ 73878177 (+) |
| LOC110538416 | LOC106601280 | coding | downstream | 3402 | 74107487 ~ 74135447 (+) |
| LOC110538414 | LOC106607202 | coding | downstream | 307655 | 74411740 ~ 74421010 (+) |
| LOC110538410 | LOC103358203 | coding | downstream | 380073 | 74484158 ~ 74529823 (+) |
| LOC118937740 | mfap4 | coding | downstream | 425947 | 74530032 ~ 74532544 (+) |
| LOC110538412 | LOC106607198 | coding | downstream | 441626 | 74545711 ~ 74551332 (+) |
| G1109948 | NA | non-coding | upstream | 8131 | 74095154 ~ 74095384 (+) |
| G1109946 | NA | non-coding | upstream | 9932 | 74092767 ~ 74093583 (+) |
| G1109929 | NA | non-coding | upstream | 29352 | 74067271 ~ 74074163 (+) |
| G1109928 | LOC106601184 | non-coding | upstream | 30199 | 74066549 ~ 74073316 (+) |
| G1110045 | NA | non-coding | downstream | 200460 | 74304545 ~ 74306737 (+) |
| G1110083 | NA | non-coding | downstream | 274895 | 74378980 ~ 74379268 (+) |
| G1110146 | NA | non-coding | downstream | 390975 | 74495060 ~ 74498797 (+) |
| G1110154 | NA | non-coding | downstream | 430504 | 74534589 ~ 74535016 (+) |
| G1110175 | NA | non-coding | downstream | 475094 | 74579179 ~ 74579609 (+) |
| G1109786 | NA | other | upstream | 256721 | 73846255 ~ 73846794 (+) |
| G1109778 | NA | other | upstream | 268909 | 73833643 ~ 73834606 (+) |
| LOC110538462 | rpc11 | other | upstream | 717648 | 73384755 ~ 73386199 (+) |
| G1109505 | NA | other | upstream | 797361 | 73305425 ~ 73306154 (+) |
| LOC110538241 | LOC106607115 | other | upstream | 2085225 | 72016045 ~ 72019145 (+) |
| G1111126 | LOC106578813 | other | downstream | 856181 | 74960266 ~ 75048356 (+) |
| G1111805 | LOC105030512 | other | downstream | 1314704 | 75418789 ~ 75423163 (+) |
| G1111961 | NA | other | downstream | 1641054 | 75745139 ~ 75745620 (+) |
| G1111970 | LOC106601177 | other | downstream | 1646785 | 75750870 ~ 75753593 (+) |
| LOC110538360 | LOC104946491 | other | downstream | 1680265 | 75774976 ~ 75790602 (+) |
