Gene
RNA
| Item | Value |
|---|---|
| gene id | G1110146 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 74495060 ~ 74498797 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1262172 | True | 305 | lncRNA | 0.39 | 2 | 74495060 | 74498797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538414 | LOC106607202 | coding | upstream | 74050 | 74411740 ~ 74421010 (+) |
| LOC110538416 | LOC106601280 | coding | upstream | 359613 | 74107487 ~ 74135447 (+) |
| LOC110538417 | LOC106601161 | coding | upstream | 392742 | 74096931 ~ 74102318 (+) |
| LOC110538418 | LOC100380772 | coding | upstream | 434389 | 74042618 ~ 74060671 (+) |
| LOC110539171 | NA | coding | upstream | 455267 | 74038572 ~ 74039852 (+) |
| LOC118937740 | mfap4 | coding | downstream | 31235 | 74530032 ~ 74532544 (+) |
| LOC110538412 | LOC106607198 | coding | downstream | 46914 | 74545711 ~ 74551332 (+) |
| LOC118937741 | NA | coding | downstream | 65107 | 74563904 ~ 74567209 (+) |
| LOC118937743 | NA | coding | downstream | 77089 | 74575886 ~ 74580542 (+) |
| LOC110538404 | LOC106607191 | coding | downstream | 112125 | 74610922 ~ 74622960 (+) |
| G1110083 | NA | non-coding | upstream | 115792 | 74378980 ~ 74379268 (+) |
| G1110045 | NA | non-coding | upstream | 188323 | 74304545 ~ 74306737 (+) |
| G1109950 | NA | non-coding | upstream | 390975 | 74103515 ~ 74104085 (+) |
| G1109948 | NA | non-coding | upstream | 399676 | 74095154 ~ 74095384 (+) |
| G1109946 | NA | non-coding | upstream | 401477 | 74092767 ~ 74093583 (+) |
| G1110154 | NA | non-coding | downstream | 35792 | 74534589 ~ 74535016 (+) |
| G1110175 | NA | non-coding | downstream | 80382 | 74579179 ~ 74579609 (+) |
| G1110195 | LOC106607192 | non-coding | downstream | 106326 | 74605123 ~ 74607679 (+) |
| G1110204 | NA | non-coding | downstream | 141240 | 74640037 ~ 74640264 (+) |
| G1110205 | NA | non-coding | downstream | 141646 | 74640443 ~ 74640729 (+) |
| G1109786 | NA | other | upstream | 648266 | 73846255 ~ 73846794 (+) |
| G1109778 | NA | other | upstream | 660454 | 73833643 ~ 73834606 (+) |
| LOC110538462 | rpc11 | other | upstream | 1109193 | 73384755 ~ 73386199 (+) |
| G1109505 | NA | other | upstream | 1188906 | 73305425 ~ 73306154 (+) |
| LOC110538241 | LOC106607115 | other | upstream | 2476770 | 72016045 ~ 72019145 (+) |
| G1111126 | LOC106578813 | other | downstream | 461469 | 74960266 ~ 75048356 (+) |
| G1111805 | LOC105030512 | other | downstream | 919992 | 75418789 ~ 75423163 (+) |
| G1111961 | NA | other | downstream | 1246342 | 75745139 ~ 75745620 (+) |
| G1111970 | LOC106601177 | other | downstream | 1252073 | 75750870 ~ 75753593 (+) |
| LOC110538360 | LOC104946491 | other | downstream | 1285553 | 75774976 ~ 75790602 (+) |
