G1110154


Basic Information

Item Value
gene id G1110154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74534589 ~ 74535016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1262180
atggacagagccgggagaaggacagatggacagagcagggagaaggacagatggacagagcagggagaaggacagATGGACAGAGCATggagatggacagatggacagagcggGGAGAAGGACAGATCAGGGAGAAGGACAGGTTGACAGAGCAGGGAGAGATAAAGGACCACTGTTTAACTGAGGGAATCCTCCTGCTTGCACATGCATGTGCGATCAGCTATTCCCTATCTCAGGCTAATCATCTACATGAAAACATAACCTGCGGGTTCACTGTCGGGGCATTAGGGCAAAGTCTTTTTACTGCTGAATGTT

Function

NR:

description
PREDICTED: retinol dehydrogenase 8-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1262180 True 315 lncRNA 0.51 2 74534589 74535016

Neighbor

gene id symbol gene type direction distance location
LOC118937740 mfap4 coding upstream 2045 74530032 ~ 74532544 (+)
LOC110538410 LOC103358203 coding upstream 4766 74484158 ~ 74529823 (+)
LOC110538414 LOC106607202 coding upstream 113579 74411740 ~ 74421010 (+)
LOC110538416 LOC106601280 coding upstream 399142 74107487 ~ 74135447 (+)
LOC110538417 LOC106601161 coding upstream 432271 74096931 ~ 74102318 (+)
LOC110538412 LOC106607198 coding downstream 10695 74545711 ~ 74551332 (+)
LOC118937741 NA coding downstream 28888 74563904 ~ 74567209 (+)
LOC118937743 NA coding downstream 40870 74575886 ~ 74580542 (+)
LOC110538404 LOC106607191 coding downstream 75906 74610922 ~ 74622960 (+)
LOC110538405 LOC106607193 coding downstream 88292 74623308 ~ 74632677 (+)
G1110146 NA non-coding upstream 35792 74495060 ~ 74498797 (+)
G1110083 NA non-coding upstream 155321 74378980 ~ 74379268 (+)
G1110045 NA non-coding upstream 227852 74304545 ~ 74306737 (+)
G1109950 NA non-coding upstream 430504 74103515 ~ 74104085 (+)
G1109948 NA non-coding upstream 439205 74095154 ~ 74095384 (+)
G1110175 NA non-coding downstream 44163 74579179 ~ 74579609 (+)
G1110195 LOC106607192 non-coding downstream 70107 74605123 ~ 74607679 (+)
G1110204 NA non-coding downstream 105021 74640037 ~ 74640264 (+)
G1110205 NA non-coding downstream 105427 74640443 ~ 74640729 (+)
G1110215 NA non-coding downstream 124040 74659056 ~ 74659390 (+)
G1109786 NA other upstream 687795 73846255 ~ 73846794 (+)
G1109778 NA other upstream 699983 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1148722 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1228435 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2516299 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 425250 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 883773 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1210123 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1215854 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1249334 75774976 ~ 75790602 (+)

Expression


Co-expression Network