G1110216


Basic Information

Item Value
gene id G1110216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74660031 ~ 74660345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1262256
atcctggtttgtttccaggctctgtcgcagctgtgactgggagacccatggggcggcagtgaacaattggcccagcatcgtctgggttaggggagggtttggccagcagggatgtccttgtcccatcgtgctctagctcctgtggtgggctgggtgcCTGCACGTTGACactgtcgccaggtgtacggtgtttcatCTGACACAtaggtgtggctggcttccgggttaagcgggcattgtgtcaaagaagcagtgcagcttggttgggttgtgtttcggaggacgcgcggctcttgaccttcgcctctcccgagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1262256 True 315 lncRNA 0.59 1 74660031 74660345

Neighbor

gene id symbol gene type direction distance location
LOC110538406 LOC106607190 coding upstream 20542 74637224 ~ 74639489 (+)
LOC110538405 LOC106607193 coding upstream 27354 74623308 ~ 74632677 (+)
LOC110538404 LOC106607191 coding upstream 37071 74610922 ~ 74622960 (+)
LOC118937743 NA coding upstream 79489 74575886 ~ 74580542 (+)
LOC118937741 NA coding upstream 92822 74563904 ~ 74567209 (+)
LOC110538402 LOC106601265 coding downstream 70189 74730534 ~ 74761760 (+)
LOC110538400 NA coding downstream 109660 74770005 ~ 74776525 (+)
LOC110538398 LOC106607185 coding downstream 116426 74776771 ~ 74784585 (+)
LOC110538397 LOC106607181 coding downstream 132068 74792413 ~ 74831994 (+)
LOC110538393 LOC106601259 coding downstream 270517 74930862 ~ 74933801 (+)
G1110215 NA non-coding upstream 641 74659056 ~ 74659390 (+)
G1110205 NA non-coding upstream 19302 74640443 ~ 74640729 (+)
G1110204 NA non-coding upstream 19767 74640037 ~ 74640264 (+)
G1110195 LOC106607192 non-coding upstream 52352 74605123 ~ 74607679 (+)
G1110175 NA non-coding upstream 80422 74579179 ~ 74579609 (+)
G1110952 NA non-coding downstream 3593 74663938 ~ 74664363 (+)
G1110959 NA non-coding downstream 13619 74673964 ~ 74674248 (+)
G1110961 NA non-coding downstream 16002 74676347 ~ 74676589 (+)
G1110963 NA non-coding downstream 17537 74677882 ~ 74678124 (+)
G1110964 NA non-coding downstream 18186 74678531 ~ 74678748 (+)
G1109786 NA other upstream 813237 73846255 ~ 73846794 (+)
G1109778 NA other upstream 825425 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1274164 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1353877 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2641741 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 299921 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 758444 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1084794 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1090525 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1124005 75774976 ~ 75790602 (+)

Expression


Co-expression Network