G1110964


Basic Information

Item Value
gene id G1110964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74678531 ~ 74678748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263112
GGTTAAAGACCTgaagaataaaccctcctcctcacagttgcccatgtcccttaatgttgatgatgatgttgttactgacaagaagcacatggctgagctctttaatcaccacttcattaagtcaggattcctatttgactcagccatgccttcTTTGcatgtccaacatttcctcatctctcaccccttctaatgcaactATCTCCGATGCTTTTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263112 True 218 lncRNA 0.44 1 74678531 74678748

Neighbor

gene id symbol gene type direction distance location
LOC110538406 LOC106607190 coding upstream 39042 74637224 ~ 74639489 (+)
LOC110538405 LOC106607193 coding upstream 45854 74623308 ~ 74632677 (+)
LOC110538404 LOC106607191 coding upstream 55571 74610922 ~ 74622960 (+)
LOC118937743 NA coding upstream 97989 74575886 ~ 74580542 (+)
LOC118937741 NA coding upstream 111322 74563904 ~ 74567209 (+)
LOC110538402 LOC106601265 coding downstream 51786 74730534 ~ 74761760 (+)
LOC110538400 NA coding downstream 91257 74770005 ~ 74776525 (+)
LOC110538398 LOC106607185 coding downstream 98023 74776771 ~ 74784585 (+)
LOC110538397 LOC106607181 coding downstream 113665 74792413 ~ 74831994 (+)
LOC110538393 LOC106601259 coding downstream 252114 74930862 ~ 74933801 (+)
G1110963 NA non-coding upstream 407 74677882 ~ 74678124 (+)
G1110961 NA non-coding upstream 1942 74676347 ~ 74676589 (+)
G1110959 NA non-coding upstream 4283 74673964 ~ 74674248 (+)
G1110952 NA non-coding upstream 14168 74663938 ~ 74664363 (+)
G1110216 NA non-coding upstream 18186 74660031 ~ 74660345 (+)
G1110966 NA non-coding downstream 1914 74680662 ~ 74680877 (+)
G1110984 NA non-coding downstream 13915 74692663 ~ 74698625 (+)
G1110998 NA non-coding downstream 40241 74718989 ~ 74719272 (+)
G1111001 NA non-coding downstream 44854 74723602 ~ 74723902 (+)
G1111002 LOC106604990 non-coding downstream 46550 74725298 ~ 74725701 (+)
G1109786 NA other upstream 831737 73846255 ~ 73846794 (+)
G1109778 NA other upstream 843925 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1292664 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1372377 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2660241 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 281518 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 740041 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1066391 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1072122 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1105602 75774976 ~ 75790602 (+)

Expression


Co-expression Network