G1110998


Basic Information

Item Value
gene id G1110998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74718989 ~ 74719272 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263156
CCTCTCTATTGTCCCCCTCAGGTGTAGAGAGATATGTGAACTCTCCAGGGATCAAGTCTTCATCGTCCTCTTCACTCAGCAAAGAGGTCATGGACCTAGAGAATGCACACAACAGAGACATAGTAACAAAAATGTCCATGGCATTTTGGACTCAACCtcattattattactactgaaGAGGAAGTAAACCAATAAACATTTTAGAGCGCTTGTATCCATCTAAGCAGTATCTCTCACTAAGTGGGGCTGGTTATTGGTACACATGGTGAGGGGTATGGGAGTAA

Function

NR:

description
uncharacterized protein LOC109897337

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263156 True 284 lncRNA 0.43 1 74718989 74719272

Neighbor

gene id symbol gene type direction distance location
LOC110538406 LOC106607190 coding upstream 79500 74637224 ~ 74639489 (+)
LOC110538405 LOC106607193 coding upstream 86312 74623308 ~ 74632677 (+)
LOC110538404 LOC106607191 coding upstream 96029 74610922 ~ 74622960 (+)
LOC118937743 NA coding upstream 138447 74575886 ~ 74580542 (+)
LOC118937741 NA coding upstream 151780 74563904 ~ 74567209 (+)
LOC110538402 LOC106601265 coding downstream 11262 74730534 ~ 74761760 (+)
LOC110538400 NA coding downstream 50733 74770005 ~ 74776525 (+)
LOC110538398 LOC106607185 coding downstream 57499 74776771 ~ 74784585 (+)
LOC110538397 LOC106607181 coding downstream 73141 74792413 ~ 74831994 (+)
LOC110538393 LOC106601259 coding downstream 211590 74930862 ~ 74933801 (+)
G1110984 NA non-coding upstream 20364 74692663 ~ 74698625 (+)
G1110966 NA non-coding upstream 38112 74680662 ~ 74680877 (+)
G1110964 NA non-coding upstream 40241 74678531 ~ 74678748 (+)
G1110963 NA non-coding upstream 40865 74677882 ~ 74678124 (+)
G1110961 NA non-coding upstream 42400 74676347 ~ 74676589 (+)
G1111001 NA non-coding downstream 4330 74723602 ~ 74723902 (+)
G1111002 LOC106604990 non-coding downstream 6026 74725298 ~ 74725701 (+)
G1110993 NA non-coding downstream 46245 74765517 ~ 74766894 (+)
G1110987 rpl23 non-coding downstream 65543 74784815 ~ 74786587 (+)
G1110989 NA non-coding downstream 112867 74832139 ~ 74836922 (+)
G1109786 NA other upstream 872195 73846255 ~ 73846794 (+)
G1109778 NA other upstream 884383 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1333122 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1412835 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2700699 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 240994 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 699517 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1025867 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1031598 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1065078 75774976 ~ 75790602 (+)

Expression


Co-expression Network