G1110993


Basic Information

Item Value
gene id G1110993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74765517 ~ 74766894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263151
ttcctcctgacagagcttgtcagtcactgagtcaggtttgtatgcctccttgctcgcacatggtatttcagttctgcccacaaacgttctatatgattgaggtcagggctttgtgaaggctTTTGTGAATACCTTGACtatgttgttcttaagccattttgccacaactctggaagtatgcttagggtcattgtccatttggaagacccatttgtgaccaagctttaacttcctgactgatgtcttgatgttgcttcaatatatacaaataattatcctacctcatgatgccatctattttgtgaagtgcaccactccctcctgcagcaaagcacccccacaacatgatgttgccacccccgtgcttcacggttggcatggtgttcttcagcttgcaagccttcccctttttcctccaaacataacaatggtcattatggccaaacagttctattttagtttcatcagaccagaggacatttctccaaaaagtacgatctttgtcctcatgtgcggttgcaaaccgtagtctggcttttttatggcggttttggagcagtggcttcttcctggctgagcagcctttcaggttatgtcgatataggactcgttttactgtggctattgatacttttgtaccggtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcattttttgcACCAAAACActgatctctaggagacagaacgcgtctcctacctgagaggtatgacggctgcgtggtcccatggtgtttatacttgcatactattgtttgtacagatgaacgtggtaccttcagacgtttgcaaattgctcccaagaatgaaccagacttgtggaggtctacaatttttttctgaggtcttggctgagttattttgattttccatagatgtcaagcaaagaggcactgagtttgatggtaggccttgaaatacatccacaggtacacttccaattggctcaaatgatgccaattagcctatcagaagcttctaaagccatgacattttctggaattgtccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaatgactgtgtcaagcacaaagtagatgtccttaccaacttgccaaaactctagtttgttaacaagaaatgtgtggagtggttaaaaaactagttttaatgactccaacctaaaagtatgtaaacttccgacttcaactgtatactgaacacaaatataaacacaacatgtaaagtgttggtcccatgtttcatgaactgaaataaaagatcccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263151 True 1378 lncRNA 0.42 1 74765517 74766894

Neighbor

gene id symbol gene type direction distance location
LOC110538402 LOC106601265 coding upstream 3757 74730534 ~ 74761760 (+)
LOC110538406 LOC106607190 coding upstream 126028 74637224 ~ 74639489 (+)
LOC110538405 LOC106607193 coding upstream 132840 74623308 ~ 74632677 (+)
LOC110538404 LOC106607191 coding upstream 142557 74610922 ~ 74622960 (+)
LOC118937743 NA coding upstream 184975 74575886 ~ 74580542 (+)
LOC110538400 NA coding downstream 3111 74770005 ~ 74776525 (+)
LOC110538398 LOC106607185 coding downstream 9877 74776771 ~ 74784585 (+)
LOC110538397 LOC106607181 coding downstream 25519 74792413 ~ 74831994 (+)
LOC110538393 LOC106601259 coding downstream 163968 74930862 ~ 74933801 (+)
LOC110538391 LOC106601294 coding downstream 174425 74941319 ~ 74942346 (+)
G1111002 LOC106604990 non-coding upstream 39816 74725298 ~ 74725701 (+)
G1111001 NA non-coding upstream 41615 74723602 ~ 74723902 (+)
G1110998 NA non-coding upstream 46245 74718989 ~ 74719272 (+)
G1110984 NA non-coding upstream 66892 74692663 ~ 74698625 (+)
G1110966 NA non-coding upstream 84640 74680662 ~ 74680877 (+)
G1110987 rpl23 non-coding downstream 17921 74784815 ~ 74786587 (+)
G1110989 NA non-coding downstream 65245 74832139 ~ 74836922 (+)
G1111035 NA non-coding downstream 71809 74838703 ~ 74840368 (+)
G1111036 NA non-coding downstream 74398 74841292 ~ 74841617 (+)
G1111037 LOC106601258 non-coding downstream 74904 74841798 ~ 74842395 (+)
G1109786 NA other upstream 918723 73846255 ~ 73846794 (+)
G1109778 NA other upstream 930911 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1379650 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1459363 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2747227 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 193372 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 651895 75418789 ~ 75423163 (+)
G1111961 NA other downstream 978245 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 983976 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1017456 75774976 ~ 75790602 (+)

Expression


Co-expression Network