G1111037 (LOC106601258)


Basic Information

Item Value
gene id G1111037
gene name LOC106601258
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74841798 ~ 74842395 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263199
CCCTGAGTTCCTGTAGCTCCTCGCACATATCctcgttctcgctctctgtctcgtcACTGCTGACATACGAGGCGCTGCGCGTGTAGCTCATCCAGGGCTGGTTTAGGTTGCTCCCGCTAAACTGGGGGCTCCCCGCTGTACCCTCCCACAGGCTCAGGCTCAGCCTCCGGCCCCCCCTTCTCCtcagctcctcctcctcatcctcctctccctccttttgcTCCTTGTCGAGCTCCTTGTCGGGCTCCTTGTCTGGCTCCTTGTCGGGCTCCTCCTCACTCTTCTGCTGGTCCTCCTGCTCTGTCTGCTTAGGGCCTCCAGGCAAGGAGTGGGTGATGTCTAGGTTACACAGGGGCCCGCCTGGGGATCGCTGGGGAGGGGACACAGTTACAGTGCTAATGCTGCTTTCTGATTCGCCCCCCTGCTCCTCGGTGCTGGTATCAGATTCACTGTCCCGGGAGGAAGGGCTGCTGCTAACGGTGACAGTGGGCGGGGTTTGGTGTTGTGGGTGGGTTTCGGGAGGATCCTGGGCTGGGCTAGCGGAGGCTGCAGGGATCTCTCTGCTGGGTGTGACTTGGAAACGGCCGACGGTAACTGT

Function

NR:

description
serine/threonine-protein kinase WNK4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263199 True 598 lncRNA 0.61 1 74841798 74842395

Neighbor

gene id symbol gene type direction distance location
LOC110538397 LOC106607181 coding upstream 9804 74792413 ~ 74831994 (+)
LOC110538398 LOC106607185 coding upstream 57213 74776771 ~ 74784585 (+)
LOC110538400 NA coding upstream 65273 74770005 ~ 74776525 (+)
LOC110538402 LOC106601265 coding upstream 80038 74730534 ~ 74761760 (+)
LOC110538406 LOC106607190 coding upstream 202309 74637224 ~ 74639489 (+)
LOC110538393 LOC106601259 coding downstream 88467 74930862 ~ 74933801 (+)
LOC110538391 LOC106601294 coding downstream 98924 74941319 ~ 74942346 (+)
LOC110538388 LOC106601254 coding downstream 117642 74960037 ~ 75102995 (+)
LOC110538390 LOC106578813 coding downstream 195947 75038342 ~ 75048707 (+)
LOC110538386 LOC106607176 coding downstream 293866 75136261 ~ 75216446 (+)
G1111036 NA non-coding upstream 181 74841292 ~ 74841617 (+)
G1111035 NA non-coding upstream 1430 74838703 ~ 74840368 (+)
G1110989 NA non-coding upstream 4876 74832139 ~ 74836922 (+)
G1110987 rpl23 non-coding upstream 55211 74784815 ~ 74786587 (+)
G1110993 NA non-coding upstream 74904 74765517 ~ 74766894 (+)
G1111038 LOC106601258 non-coding downstream 817 74843212 ~ 74844083 (+)
G1111041 NA non-coding downstream 5667 74848062 ~ 74848291 (+)
G1111043 NA non-coding downstream 7149 74849544 ~ 74849803 (+)
G1111044 NA non-coding downstream 8096 74850491 ~ 74851142 (+)
G1111046 NA non-coding downstream 11461 74853856 ~ 74854156 (+)
G1109786 NA other upstream 995004 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1007192 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1455931 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1535644 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2823508 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 117871 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 576394 75418789 ~ 75423163 (+)
G1111961 NA other downstream 902744 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 908475 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 941955 75774976 ~ 75790602 (+)

Expression


Co-expression Network