G1111044


Basic Information

Item Value
gene id G1111044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74850491 ~ 74851142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263206
atacaatgtgattttatggatttttgttttagattccgtctctcacagttgaagtgtacctatgataaaaattacagacctctacatgctttgtaagtaggaaaacctgcaaaatcggcagtgtatcaaatacttgttctccacactgtatatacactgaacaaaaatataaatgcaacatgtaaagtgttggtcccatgtttcatgagctgaaataaaagatcccagaaatgtttcatatgcacaaaaagctttttctctaaaatgttgtgcacaaatttgttaatttccctgttagtgagcatttctcctttgccaagataatccatccacctgacaggtgtggcgtatcaagaagctgattaaacaacatgatcattacacaggtgcaccttgtgctggggacattaaaaggccactctaaaatgtgcagtttggtcacacaacacaatgccacagatgtctcaagttttgagggagcgtgcagttggcatgctgactgcaggaatgtccaacagagctgttgccagagaatttcatgttcatttctctaccataagccgcctccaatgttgttttagtgAATTTGgctgtacatccaaccggcctcacaaccagcCCACAAGTAAGCACACCAGCTCAGGACtgccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263206 True 652 lncRNA 0.41 1 74850491 74851142

Neighbor

gene id symbol gene type direction distance location
LOC110538397 LOC106607181 coding upstream 18497 74792413 ~ 74831994 (+)
LOC110538398 LOC106607185 coding upstream 65906 74776771 ~ 74784585 (+)
LOC110538400 NA coding upstream 73966 74770005 ~ 74776525 (+)
LOC110538402 LOC106601265 coding upstream 88731 74730534 ~ 74761760 (+)
LOC110538406 LOC106607190 coding upstream 211002 74637224 ~ 74639489 (+)
LOC110538393 LOC106601259 coding downstream 79720 74930862 ~ 74933801 (+)
LOC110538391 LOC106601294 coding downstream 90177 74941319 ~ 74942346 (+)
LOC110538388 LOC106601254 coding downstream 108895 74960037 ~ 75102995 (+)
LOC110538390 LOC106578813 coding downstream 187200 75038342 ~ 75048707 (+)
LOC110538386 LOC106607176 coding downstream 285119 75136261 ~ 75216446 (+)
G1111043 NA non-coding upstream 688 74849544 ~ 74849803 (+)
G1111041 NA non-coding upstream 2200 74848062 ~ 74848291 (+)
G1111038 LOC106601258 non-coding upstream 6408 74843212 ~ 74844083 (+)
G1111037 LOC106601258 non-coding upstream 8096 74841798 ~ 74842395 (+)
G1111036 NA non-coding upstream 8874 74841292 ~ 74841617 (+)
G1111046 NA non-coding downstream 2714 74853856 ~ 74854156 (+)
G1111047 NA non-coding downstream 4116 74855258 ~ 74855548 (+)
G1111048 LOC106607180 non-coding downstream 4935 74856077 ~ 74856455 (+)
G1111049 LOC106607180 non-coding downstream 6316 74857458 ~ 74857807 (+)
G1111050 LOC106607180 non-coding downstream 6836 74857978 ~ 74858222 (+)
G1109786 NA other upstream 1003697 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1015885 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1464624 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1544337 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2832201 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 109124 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 567647 75418789 ~ 75423163 (+)
G1111961 NA other downstream 893997 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 899728 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 933208 75774976 ~ 75790602 (+)

Expression


Co-expression Network