G1111059


Basic Information

Item Value
gene id G1111059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74870212 ~ 74870828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263227
taatcttatttgtatttaattaaaTGTACTGACCGAAGATTACACAGTACAACAGCAGAAGTGTTGTACCTGtatacatgtatacattatatgtactattattactactactgaaATGAACTGTATTTTATTATCCTCAATGCATTGCACTGTATTTACTGAAATGCTGTACCACTATATTGCTTTGGCAATACCTACCAATTgtatttcatgccaataaagcaatctgaatttgagagagagaaacggagagacaagagctgagcaaagaaaagagtcccctcatccagctggtcctggggctgagttcacaaacctgttccactaacacactgaagcctcaggaccagaacatccaatcaatcaggatcaaccaaattacaacacagtcaaaacaaaactatattgcttattgggaaacacaaacacaaagcaaaatgcagtgctatctggccctaaattgacagtacactgtggctaaattttttgaccatggttactgatcaaagccttagaaaaaccttgacaaagtacaggctcagtgagcacagccttgccattgagaagggtagacacaggaaaacctggctccctgtagaggaaaggctgtgcaacca

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263227 True 617 lncRNA 0.39 1 74870212 74870828

Neighbor

gene id symbol gene type direction distance location
LOC110538397 LOC106607181 coding upstream 38218 74792413 ~ 74831994 (+)
LOC110538398 LOC106607185 coding upstream 85627 74776771 ~ 74784585 (+)
LOC110538400 NA coding upstream 93687 74770005 ~ 74776525 (+)
LOC110538402 LOC106601265 coding upstream 108452 74730534 ~ 74761760 (+)
LOC110538406 LOC106607190 coding upstream 230723 74637224 ~ 74639489 (+)
LOC110538393 LOC106601259 coding downstream 60034 74930862 ~ 74933801 (+)
LOC110538391 LOC106601294 coding downstream 70491 74941319 ~ 74942346 (+)
LOC110538388 LOC106601254 coding downstream 89209 74960037 ~ 75102995 (+)
LOC110538390 LOC106578813 coding downstream 167514 75038342 ~ 75048707 (+)
LOC110538386 LOC106607176 coding downstream 265433 75136261 ~ 75216446 (+)
G1111057 NA non-coding upstream 3220 74866421 ~ 74866992 (+)
G1111053 NA non-coding upstream 10701 74859189 ~ 74859511 (+)
G1111050 LOC106607180 non-coding upstream 11990 74857978 ~ 74858222 (+)
G1111049 LOC106607180 non-coding upstream 12405 74857458 ~ 74857807 (+)
G1111048 LOC106607180 non-coding upstream 13757 74856077 ~ 74856455 (+)
G1111062 NA non-coding downstream 10065 74880893 ~ 74881122 (+)
G1111063 NA non-coding downstream 11759 74882587 ~ 74883074 (+)
G1111066 NA non-coding downstream 16862 74887690 ~ 74887901 (+)
G1111070 NA non-coding downstream 23300 74894128 ~ 74894598 (+)
G1111074 NA non-coding downstream 27264 74898092 ~ 74898354 (+)
G1109786 NA other upstream 1023418 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1035606 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1484345 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1564058 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2851922 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 89438 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 547961 75418789 ~ 75423163 (+)
G1111961 NA other downstream 874311 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 880042 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 913522 75774976 ~ 75790602 (+)

Expression


Co-expression Network