Gene
RNA
| Item | Value |
|---|---|
| gene id | G1111062 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 74880893 ~ 74881122 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1263230 | True | 230 | lncRNA | 0.53 | 1 | 74880893 | 74881122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538397 | LOC106607181 | coding | upstream | 48899 | 74792413 ~ 74831994 (+) |
| LOC110538398 | LOC106607185 | coding | upstream | 96308 | 74776771 ~ 74784585 (+) |
| LOC110538400 | NA | coding | upstream | 104368 | 74770005 ~ 74776525 (+) |
| LOC110538402 | LOC106601265 | coding | upstream | 119133 | 74730534 ~ 74761760 (+) |
| LOC110538406 | LOC106607190 | coding | upstream | 241404 | 74637224 ~ 74639489 (+) |
| LOC110538393 | LOC106601259 | coding | downstream | 49740 | 74930862 ~ 74933801 (+) |
| LOC110538391 | LOC106601294 | coding | downstream | 60197 | 74941319 ~ 74942346 (+) |
| LOC110538388 | LOC106601254 | coding | downstream | 78915 | 74960037 ~ 75102995 (+) |
| LOC110538390 | LOC106578813 | coding | downstream | 157220 | 75038342 ~ 75048707 (+) |
| LOC110538386 | LOC106607176 | coding | downstream | 255139 | 75136261 ~ 75216446 (+) |
| G1111059 | NA | non-coding | upstream | 10065 | 74870212 ~ 74870828 (+) |
| G1111057 | NA | non-coding | upstream | 13901 | 74866421 ~ 74866992 (+) |
| G1111053 | NA | non-coding | upstream | 21382 | 74859189 ~ 74859511 (+) |
| G1111050 | LOC106607180 | non-coding | upstream | 22671 | 74857978 ~ 74858222 (+) |
| G1111049 | LOC106607180 | non-coding | upstream | 23086 | 74857458 ~ 74857807 (+) |
| G1111063 | NA | non-coding | downstream | 1465 | 74882587 ~ 74883074 (+) |
| G1111066 | NA | non-coding | downstream | 6568 | 74887690 ~ 74887901 (+) |
| G1111070 | NA | non-coding | downstream | 13006 | 74894128 ~ 74894598 (+) |
| G1111074 | NA | non-coding | downstream | 16970 | 74898092 ~ 74898354 (+) |
| G1111076 | NA | non-coding | downstream | 18452 | 74899574 ~ 74899799 (+) |
| G1109786 | NA | other | upstream | 1034099 | 73846255 ~ 73846794 (+) |
| G1109778 | NA | other | upstream | 1046287 | 73833643 ~ 73834606 (+) |
| LOC110538462 | rpc11 | other | upstream | 1495026 | 73384755 ~ 73386199 (+) |
| G1109505 | NA | other | upstream | 1574739 | 73305425 ~ 73306154 (+) |
| LOC110538241 | LOC106607115 | other | upstream | 2862603 | 72016045 ~ 72019145 (+) |
| G1111126 | LOC106578813 | other | downstream | 79144 | 74960266 ~ 75048356 (+) |
| G1111805 | LOC105030512 | other | downstream | 537667 | 75418789 ~ 75423163 (+) |
| G1111961 | NA | other | downstream | 864017 | 75745139 ~ 75745620 (+) |
| G1111970 | LOC106601177 | other | downstream | 869748 | 75750870 ~ 75753593 (+) |
| LOC110538360 | LOC104946491 | other | downstream | 903228 | 75774976 ~ 75790602 (+) |
