G1111578


Basic Information

Item Value
gene id G1111578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75077533 ~ 75078313 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263779
GTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgtgtgtgtgtaacctaccTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGTCCGTGGTCGTGTTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtaacctACCTGGCTGTCGTCGTGGTCGTCCATGCTCTTACTGTactctagtgtgtgtgtagtgtgcgtgtgtgtgtgtaacctaccTGGCTGTCATCGTGGTTGTCCATGTCGTACTGTGAGCCCGACTGTCCCTCGTTCATCTTGTCTCCCAGGAGGAAGCCCAGGCGCGTCATCAGGGTGTTGGCTGCCTCGTCCACAGAGGGAGGGGGGCCCAGCTCCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263779 True 781 lncRNA 0.53 1 75077533 75078313

Neighbor

gene id symbol gene type direction distance location
LOC110538392 LOC106601294 coding downstream 137415 74939090 ~ 74940118 (-)
LOC110538394 LOC106601258 coding downstream 140477 74837361 ~ 74937056 (-)
LOC110538399 rl23 coding downstream 289392 74784815 ~ 74788141 (-)
LOC110538969 LOC106607189 coding downstream 357059 74714655 ~ 74720474 (-)
LOC110538407 LOC106607192 coding downstream 466748 74605118 ~ 74610785 (-)
LOC110538389 LOC106601255 coding upstream 26157 75104470 ~ 75113299 (-)
LOC110538387 NA coding upstream 139255 75216004 ~ 75220939 (-)
LOC110538381 LOC106601248 coding upstream 213632 75288118 ~ 75366262 (-)
desi1a LOC106601247 coding upstream 353236 75431549 ~ 75434649 (-)
LOC110538375 LOC106607167 coding upstream 386774 75465087 ~ 75501246 (-)
G1111592 NA non-coding downstream 4951 75072332 ~ 75072582 (-)
G1111558 NA non-coding downstream 32343 75035827 ~ 75045190 (-)
G1111530 NA non-coding downstream 56893 74999751 ~ 75020640 (-)
G1111458 NA non-coding downstream 181287 74896029 ~ 74896246 (-)
G1111455 NA non-coding downstream 184443 74892703 ~ 74893090 (-)
G1111579 NA non-coding upstream 2752 75081065 ~ 75081361 (-)
G1111598 LOC106601254 non-coding upstream 11268 75089581 ~ 75089850 (-)
G1111603 LOC106607178 non-coding upstream 14743 75093056 ~ 75099174 (-)
G1111661 NA non-coding upstream 93709 75172022 ~ 75172227 (-)
G1111666 NA non-coding upstream 104116 75182429 ~ 75182666 (-)
G1111451 NA other downstream 196726 74880498 ~ 74880807 (-)
G1111424 LOC106601260 other downstream 252943 74817975 ~ 74824590 (-)
G1110941 NA other downstream 426770 74650283 ~ 74650763 (-)
G1110701 NA other downstream 872342 74204221 ~ 74205191 (-)
LOC110538422 LOC106601282 other downstream 998256 74068285 ~ 74079316 (-)
G1111672 NA other upstream 111872 75190185 ~ 75190431 (-)
G1112697 LOC106607147 other upstream 718137 75796450 ~ 75796798 (-)
G1112997 NA other upstream 1302615 76380928 ~ 76381727 (-)
G1113013 NA other upstream 1334627 76412940 ~ 76414211 (-)
LOC110538323 NA other upstream 1350235 76428548 ~ 76478939 (-)

Expression

G1111578 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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G1111578 Expression in each Bioproject

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G1111578 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network