G1111306


Basic Information

Item Value
gene id G1111306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75283884 ~ 75284105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263479
TGCAAGTATTTAGCATGTTAGcgaacccttcccctaaccttaaccctttaacctaactcctaactctatcccagactatttgcattgccccccctttacgctgctgctattctctgtttattatctatgcatagtcactttaactctacctacatgtacatattacctcaatttccCTGACTAGCCGGTGCCCccgcccattgactctgtaccagtaccctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263479 True 222 lncRNA 0.45 1 75283884 75284105

Neighbor

gene id symbol gene type direction distance location
LOC110538383 LOC106601250 coding upstream 4342 75236926 ~ 75279542 (+)
LOC110538384 LOC106601293 coding upstream 50337 75231002 ~ 75233547 (+)
LOC110538385 LOC106607175 coding upstream 55480 75221851 ~ 75228404 (+)
LOC110538386 LOC106607176 coding upstream 67438 75136261 ~ 75216446 (+)
LOC110538390 LOC106578813 coding upstream 235177 75038342 ~ 75048707 (+)
LOC110538378 LOC106601246 coding downstream 159883 75443988 ~ 75463480 (+)
LOC110538377 f10a1 coding downstream 226894 75510999 ~ 75517780 (+)
LOC110538373 LOC106601242 coding downstream 309646 75593751 ~ 75608737 (+)
LOC110538372 LOC106601241 coding downstream 335233 75619338 ~ 75623953 (+)
LOC110538366 LOC106607160 coding downstream 354149 75638254 ~ 75649590 (+)
G1111250 NA non-coding upstream 2607 75279802 ~ 75281277 (+)
G1111287 NA non-coding upstream 85308 75198303 ~ 75198576 (+)
G1111284 NA non-coding upstream 93926 75189725 ~ 75189958 (+)
G1111275 NA non-coding upstream 104113 75179572 ~ 75179771 (+)
G1111267 NA non-coding upstream 113166 75170500 ~ 75170718 (+)
G1111307 NA non-coding downstream 34 75284139 ~ 75284459 (+)
G1111312 LOC106601248 non-coding downstream 4026 75288131 ~ 75294663 (+)
G1111798 NA non-coding downstream 109393 75393498 ~ 75414066 (+)
G1111871 NA non-coding downstream 250635 75534740 ~ 75536458 (+)
G1111872 NA non-coding downstream 254180 75538285 ~ 75538518 (+)
G1111126 LOC106578813 other upstream 235528 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1437090 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1449278 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1898017 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1977730 73305425 ~ 73306154 (+)
G1111805 LOC105030512 other downstream 134684 75418789 ~ 75423163 (+)
G1111961 NA other downstream 461034 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 466765 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 500245 75774976 ~ 75790602 (+)
LOC110538356 LOC106607146 other downstream 564500 75838066 ~ 75853712 (+)

Expression


Co-expression Network