G1111874


Basic Information

Item Value
gene id G1111874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75539608 ~ 75539812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264122
gccttagacaacaacattgatgtatacgctgactcagtgagcgagttcattagcaagtgcatcgtaGATGTTGTACCCGctctgactattaaaaccttccctatccagaaaccgtggattaatggcagcattcgcgcaaaactgaaagctcaAACCACAGCTTTCAATCATGGCAAGGCaaccagaaacatgaccgaatacaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264122 True 205 lncRNA 0.44 1 75539608 75539812

Neighbor

gene id symbol gene type direction distance location
LOC110538377 f10a1 coding upstream 21828 75510999 ~ 75517780 (+)
LOC110538378 LOC106601246 coding upstream 76128 75443988 ~ 75463480 (+)
LOC110538383 LOC106601250 coding upstream 260066 75236926 ~ 75279542 (+)
LOC110538384 LOC106601293 coding upstream 306061 75231002 ~ 75233547 (+)
LOC110538385 LOC106607175 coding upstream 311204 75221851 ~ 75228404 (+)
LOC110538373 LOC106601242 coding downstream 53939 75593751 ~ 75608737 (+)
LOC110538372 LOC106601241 coding downstream 79526 75619338 ~ 75623953 (+)
LOC110538366 LOC106607160 coding downstream 98442 75638254 ~ 75649590 (+)
LOC110538368 LOC106601238 coding downstream 111107 75650919 ~ 75659715 (+)
LOC110538369 csdc2 coding downstream 120153 75659965 ~ 75664321 (+)
G1111872 NA non-coding upstream 1090 75538285 ~ 75538518 (+)
G1111871 NA non-coding upstream 3150 75534740 ~ 75536458 (+)
G1111798 NA non-coding upstream 125542 75393498 ~ 75414066 (+)
G1111312 LOC106601248 non-coding upstream 244945 75288131 ~ 75294663 (+)
G1111307 NA non-coding upstream 255149 75284139 ~ 75284459 (+)
G1111890 NA non-coding downstream 23604 75563416 ~ 75563759 (+)
G1111911 NA non-coding downstream 47329 75587141 ~ 75587364 (+)
G1111913 NA non-coding downstream 48974 75588786 ~ 75589000 (+)
G1111914 NA non-coding downstream 49619 75589431 ~ 75589654 (+)
G1111805 LOC105030512 other upstream 116445 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 491252 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1692814 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1705002 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 2153741 73384755 ~ 73386199 (+)
G1111961 NA other downstream 205327 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 211058 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 244538 75774976 ~ 75790602 (+)
LOC110538356 LOC106607146 other downstream 308793 75838066 ~ 75853712 (+)
G1111968 LOC106601158 other downstream 355800 75895612 ~ 75895873 (+)

Expression


Co-expression Network