G1111922


Basic Information

Item Value
gene id G1111922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75612999 ~ 75613317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264174
accaagagctatatctgttcttagttctacattttttgacaggggcatgcttatttaagatggtgaggaaatttattttaaagaataaccaggcatcctcgactgacgggatgaggtcaatatccttccaggatatccgagccaggtcgattagaaaggcctgcttgcagaagtgttttagggagcgtttgacagtgatgaggggtggtcgtttgaccgtggacccatagcagatgcaggcaatgaggcagtgatcgctgagatcctaattgaaaacagcagaggtgtatttggagggcaagttggtcagggtaatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264174 True 319 lncRNA 0.46 1 75612999 75613317

Neighbor

gene id symbol gene type direction distance location
LOC110538373 LOC106601242 coding upstream 4262 75593751 ~ 75608737 (+)
LOC110538377 f10a1 coding upstream 95219 75510999 ~ 75517780 (+)
LOC110538378 LOC106601246 coding upstream 149519 75443988 ~ 75463480 (+)
LOC110538383 LOC106601250 coding upstream 333457 75236926 ~ 75279542 (+)
LOC110538384 LOC106601293 coding upstream 379452 75231002 ~ 75233547 (+)
LOC110538372 LOC106601241 coding downstream 6021 75619338 ~ 75623953 (+)
LOC110538366 LOC106607160 coding downstream 24937 75638254 ~ 75649590 (+)
LOC110538368 LOC106601238 coding downstream 37602 75650919 ~ 75659715 (+)
LOC110538369 csdc2 coding downstream 46648 75659965 ~ 75664321 (+)
LOC110538365 LOC106601233 coding downstream 67191 75680508 ~ 75698504 (+)
G1111921 NA non-coding upstream 124 75612599 ~ 75612875 (+)
G1111914 NA non-coding upstream 23345 75589431 ~ 75589654 (+)
G1111913 NA non-coding upstream 23999 75588786 ~ 75589000 (+)
G1111911 NA non-coding upstream 25635 75587141 ~ 75587364 (+)
G1111926 NA non-coding downstream 11557 75624874 ~ 75625085 (+)
G1111928 NA non-coding downstream 13266 75626583 ~ 75627163 (+)
G1111887 LOC106601240 non-coding downstream 18001 75631318 ~ 75636032 (+)
G1111930 NA non-coding downstream 23262 75636579 ~ 75637927 (+)
G1111932 NA non-coding downstream 66180 75679497 ~ 75679850 (+)
G1111805 LOC105030512 other upstream 189836 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 564643 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1766205 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1778393 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 2227132 73384755 ~ 73386199 (+)
G1111961 NA other downstream 131822 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 137553 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 171033 75774976 ~ 75790602 (+)
LOC110538356 LOC106607146 other downstream 235288 75838066 ~ 75853712 (+)
G1111968 LOC106601158 other downstream 282295 75895612 ~ 75895873 (+)

Expression


Co-expression Network