G1111968 (LOC106601158)


Basic Information

Item Value
gene id G1111968
gene name LOC106601158
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75895612 ~ 75895873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264223
TGCAGTATGTGGGTGGTGTCCATCAGCCAGAGGAGACCCCGCCCCCCCGACGTGGGCAGCCACGTCCAGGTGGAGGCTCTTGTAGTGCGATTGGCTATGGCTGACTTCACCCTCAGAGTGGCCGTCAGCTTCAGAGCCGGAGCCGGGTTTGCCATTCTTGCGGCGGCGTGGCTGGTACTTGTACTCCGGGTAGTCCTTCTTGTGCTGCTTCCTCAGCCTCTCCGCCTCCTCGATGAAAGGCTTCTTATCACTCTCATTCAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264223 True 262 TUCP 0.60 1 75895612 75895873

Neighbor

gene id symbol gene type direction distance location
LOC110538352 LOC106601222 coding upstream 5343 75887606 ~ 75890269 (+)
LOC110538354 LOC106607143 coding upstream 9086 75879801 ~ 75887011 (+)
LOC110538356 LOC106607146 coding upstream 44101 75838066 ~ 75853712 (+)
LOC110538357 kc1e coding upstream 59650 75823488 ~ 75835962 (+)
LOC110538359 LOC106601229 coding upstream 74549 75792255 ~ 75821063 (+)
LOC110538350 NA coding downstream 7989 75903862 ~ 75941562 (+)
LOC110538348 LOC106607138 coding downstream 58366 75954239 ~ 75957620 (+)
LOC118937896 NA coding downstream 79304 75975177 ~ 75976027 (+)
LOC110538344 cc134 coding downstream 111277 76007150 ~ 76017112 (+)
LOC110538343 LOC106607134 coding downstream 130569 76026442 ~ 76030307 (+)
G1111965 LOC106601158 non-coding upstream 210 75892325 ~ 75895402 (+)
G1112017 LOC106607145 non-coding upstream 22158 75871340 ~ 75873454 (+)
G1112014 NA non-coding upstream 29091 75865830 ~ 75866521 (+)
G1111967 LOC106601158 non-coding downstream 1574 75897447 ~ 75898292 (+)
G1112022 NA non-coding downstream 4224 75900097 ~ 75900316 (+)
G1112023 NA non-coding downstream 5051 75900924 ~ 75901153 (+)
G1112037 NA non-coding downstream 30599 75926472 ~ 75926698 (+)
G1112060 NA non-coding downstream 82193 75978066 ~ 75981041 (+)
LOC110538360 LOC104946491 other upstream 107321 75774976 ~ 75790602 (+)
G1111970 LOC106601177 other upstream 142019 75750870 ~ 75753593 (+)
G1111961 NA other upstream 149992 75745139 ~ 75745620 (+)
G1111805 LOC105030512 other upstream 472449 75418789 ~ 75423163 (+)
G1112079 NA other downstream 391725 76287598 ~ 76288502 (+)
G1112082 NA other downstream 404187 76300060 ~ 76300527 (+)
LOC100136171 LOC100136171 other downstream 568911 76464742 ~ 76470326 (+)
LOC110538313 LOC106601291 other downstream 835022 76730857 ~ 76732118 (+)
G1113861 LOC100136012 other downstream 1695848 77591721 ~ 77624996 (+)

Expression


Co-expression Network