G1112835


Basic Information

Item Value
gene id G1112835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76079186 ~ 76081818 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1265263
CTTGTAAAAGGATGGTACTTTACAAAGATATCGCATGCCCTACATTAAATATGAAAAACATTGTCAAAAGACAGTCTACTTTATCATCTCTAAAAATACAAGATAAAAAAACATTGGCTCATTGACGCAACACTACACATTTTTGTGGCACAATCAATCATGCCTACACAATGTTGGGAGGTTGGGAAAGGATCGCAACATGCATCTTCTTAGCCtcatcaaaaaaaaaaatcaagaatcCTTGCGAGACGACAACATTTCATCGAACTTCTACAAGCAATTATCCAGTCACAGAAGGCACTATATAAAACAAAAAGCAAATTCAGCTGACTTGTATCTACACACTGGAGGAATGAGTGCGATTTCCAATTTGGCTTCCCAGGATTTTACAGTTCCAAACCACTTTCTCTGTATCAATCCCAAATGTAAATTGTTATTGTTCACAATAGAGACCCACATTGTAAAATTATATTACACTGAATAAAGCGACAAATAGGTTTGCGAAGTAAAATGCGCACAATGACAACAATCACCGAGAGCAACCATTGTTCACGTACAACATTAAggtcgttccacctcaaaaagtACAAAAAGGATTGAAACGCCACCGTCTCAAATTGTTTCTGTAGTTAGTCAGAGATACGATTAGCATTCCAGAAACATTTAGTTCTCATCTCATGATTTTATTGATTGCGCCCAAATTGGAATTAACTTCTTCCTACCAATGAGTAAGACCCCCAAAAATGCCAATACTACCCCAACAAACAGTATCGTTTCAGTTATGTTCAACAAGTTCCTTGAATATTCCAACAAGTGGCAGCTTTCTGAAAGGGCTATCCCTATGGTGCAATTCTCATATGAACACTTTTTCTACATGTCCTAAACTTTGATGGAGAAATGGGCTAGGGACTAAAATGTGACAACCCTAATAAAATACATTGCATGGCAGTCATGTTTTTCAATAAAATTATAATTATTAGGGAACAGCATTGCGATTAGTGACGTTTAGCATTAATTCCAACCCAATACCATTACAAAACAATACATTGTATGTTTGGGACTTATATCACTGAAGACCATAACATTGAAAGCATTAGAACTGCTATAGAGTAAATGGTCAAACAGGAACTAATCCCGACCTTTTTTGAAGGGAATAAACCGCACCGTTTCCTGGACACATTAAGCATAAAATGACAAACTGAATTGCTTTCCTAGAGGACTGGCTTGAAATTTGGCGGATGACCACACAATGTTTTTTCATAATGAGCCAAATCTATTGGTTTTGTTTACAAAGTTGCAAAGGAAATGTTGTGACCTGTTTAATAAACACAAGAGACCAGCAAAATATATAAGAGTGCGGCAGTATAGCAGGACCACGGCATCTAATGGTCAAAACCTAGTACTTTCAAACTACTTTATGGTAAATAACGCAAGTGACTTCAATTATTCATTTCTCTGAGCATGGAGAGAGAAAATAATAAATGAAAAATCACCAGATTCAtagggaatacattacatagtatgGAGAAGTACTCCAAGCCGCAGCTTTATACCACTTGTTAAAAACAGACATAGGGTGTGGTGGGTTTTGACAATGTTATgagattcctcatgtcttactcattaGTAGGAAGATGTTTGGTCCCAATCGGATGTTGGATACTATattgaatattatctgaatcctataaataaaaaaaattgccaatttgggtgcaatcactTACCTTTGTCAGAGATCAAATTAAGTTTCAACAAAATGTTTCAGGAATGTCAATCTTACCCATTGCCAACTACAGAAactatttcagaacaatctgagatggtgggtgtcatggcttgctgaaatggcATGGAATAACTCATTAGTATGTACAAATCCATGCTCTGAAATGAAAATAGTTTGGTTTTTGACAATAATTGTATTCAGCTTTTGACAGTAGGTATGCAGAGAAAGGTAATCCAGTGCTGTTTCAGGTCACAAATACATCACAGCAACAGTCTTTACACAAATAATCCAGTTTCTCAGACCAATattttcattcactcactctcgCACATCAACAATAGAAAAAGCTTAAAAAGTGCAGATTAAAATTTGCGCGACCCAGTGTAATATGACCGATCAGCTGATACTAGTTTATGCCACTCATTGGCTGAATGATTGAAAGCTAAGGCACTATCGTGGTCCCCCGAGCCAGCATCTTCTGGTGCGAAGACTTCTGCTCCTCTCCTctctgtctctgagctagAGCCCGTGTGGCGGTCTCTCAGTGTTCCAGGCTGTTGCCTAGTTTCTGTCCCTCCTGCAGGGCAACCATGGCCAATCTCAGGTGCTCCCTAAGGCTCTGGATCTCCCGCTCACTCCTGCTCTTCATACCACCCAGCTCCCCGTGCACCTCTTTATACCGCTCACAGGCCGAC

Function

NR:

description
TRIO and F-actin-binding protein-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1265263 True 2424 lncRNA 0.39 3 76079186 76081818
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110538346 LOC106607136 coding downstream 107255 75962013 ~ 75971931 (-)
LOC110538347 LOC106601217 coding downstream 118989 75956776 ~ 75960197 (-)
LOC110538349 LOC106607139 coding downstream 145303 75932173 ~ 75933883 (-)
LOC110538351 LOC106601158 coding downstream 176973 75893477 ~ 75902213 (-)
LOC110538353 LOC106607145 coding downstream 199163 75871330 ~ 75880023 (-)
LOC110538338 LOC106607128 coding upstream 4123 76085941 ~ 76094659 (-)
LOC118937981 NA coding upstream 16758 76098552 ~ 76099257 (-)
LOC110538333 LOC106607121 coding upstream 25265 76107083 ~ 76111853 (-)
LOC110538335 LOC106601210 coding upstream 37008 76113299 ~ 76125699 (-)
LOC110538331 LOC106601211 coding upstream 45006 76126824 ~ 76136107 (-)
G1112828 srebf2 non-coding downstream 33117 76042167 ~ 76046069 (-)
G1112822 NA non-coding downstream 49298 76029540 ~ 76029888 (-)
G1112818 NA non-coding downstream 52050 76026810 ~ 76027136 (-)
G1112817 NA non-coding downstream 52706 76026215 ~ 76026480 (-)
G1112812 NA non-coding downstream 57270 76021537 ~ 76021916 (-)
G1112847 NA non-coding upstream 7092 76088910 ~ 76089567 (-)
G1112851 NA non-coding upstream 16337 76098155 ~ 76098474 (-)
G1112860 NA non-coding upstream 27314 76109132 ~ 76109371 (-)
G1112697 LOC106607147 other downstream 282388 75796450 ~ 75796798 (-)
G1111672 NA other downstream 888755 75190185 ~ 75190431 (-)
G1111451 NA other downstream 1198379 74880498 ~ 74880807 (-)
G1111424 LOC106601260 other downstream 1254596 74817975 ~ 74824590 (-)
G1110941 NA other downstream 1428423 74650283 ~ 74650763 (-)
G1112997 NA other upstream 299110 76380928 ~ 76381727 (-)
G1113013 NA other upstream 331122 76412940 ~ 76414211 (-)
LOC110538323 NA other upstream 346730 76428548 ~ 76478939 (-)
G1113043 LOC106601201 other upstream 402554 76484372 ~ 76485285 (-)
LOC110538302 LOC106601359 other upstream 746964 76828760 ~ 76844798 (-)

Expression

G1112835 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G1112835 Expression in each Bioproject

Bar chart with 17 bars.
G1112835 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network