Gene
RNA
| Item | Value |
|---|---|
| gene id | G1112892 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 76172528 ~ 76174499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1265330 | True | 1920 | lncRNA | 0.43 | 2 | 76172528 | 76174499 |
76,167,600
76,168,000
76,168,400
76,168,800
76,169,200
76,169,600
76,170,000
76,170,400
76,170,800
76,171,200
76,171,600
76,171,600
76,172,000
76,172,400
76,172,800
76,173,200
76,173,600
76,174,000
76,174,400
76,174,800
76,175,200
76,175,600
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538331 | LOC106601211 | coding | downstream | 36421 | 76126824 ~ 76136107 (-) |
| LOC110538335 | LOC106601210 | coding | downstream | 46829 | 76113299 ~ 76125699 (-) |
| LOC110538333 | LOC106607121 | coding | downstream | 60675 | 76107083 ~ 76111853 (-) |
| LOC118937981 | NA | coding | downstream | 73798 | 76098552 ~ 76099257 (-) |
| LOC110538338 | LOC106607128 | coding | downstream | 77869 | 76085941 ~ 76094659 (-) |
| LOC110538329 | LOC106601205 | coding | upstream | 165081 | 76339580 ~ 76346185 (-) |
| LOC100135986 | LOC100135986 | coding | upstream | 186669 | 76361168 ~ 76375725 (-) |
| LOC110538326 | LOC106601203 | coding | upstream | 245621 | 76420120 ~ 76425165 (-) |
| LOC110538323 | NA | coding | upstream | 254057 | 76428548 ~ 76478939 (-) |
| LOC110538317 | LOC106591500 | coding | upstream | 382423 | 76556922 ~ 76563120 (-) |
| G1112890 | NA | non-coding | downstream | 4094 | 76168103 ~ 76168434 (-) |
| G1112889 | LOC106607101 | non-coding | downstream | 4625 | 76166983 ~ 76167903 (-) |
| G1112887 | NA | non-coding | downstream | 7859 | 76163968 ~ 76164669 (-) |
| G1112877 | NA | non-coding | downstream | 28012 | 76144252 ~ 76144516 (-) |
| G1112876 | NA | non-coding | downstream | 31428 | 76140886 ~ 76141100 (-) |
| G1112952 | grin2b | non-coding | upstream | 108411 | 76282910 ~ 76287445 (-) |
| G1112958 | NA | non-coding | upstream | 114525 | 76289024 ~ 76290763 (-) |
| G1112965 | NA | non-coding | upstream | 123331 | 76297830 ~ 76298064 (-) |
| G1112969 | NA | non-coding | upstream | 124664 | 76299163 ~ 76299404 (-) |
| G1112982 | NA | non-coding | upstream | 160841 | 76335340 ~ 76335579 (-) |
| G1112697 | LOC106607147 | other | downstream | 375730 | 75796450 ~ 75796798 (-) |
| G1111672 | NA | other | downstream | 982097 | 75190185 ~ 75190431 (-) |
| G1111451 | NA | other | downstream | 1291721 | 74880498 ~ 74880807 (-) |
| G1111424 | LOC106601260 | other | downstream | 1347938 | 74817975 ~ 74824590 (-) |
| G1110941 | NA | other | downstream | 1521765 | 74650283 ~ 74650763 (-) |
| G1112997 | NA | other | upstream | 206429 | 76380928 ~ 76381727 (-) |
| G1113013 | NA | other | upstream | 238441 | 76412940 ~ 76414211 (-) |
| G1113043 | LOC106601201 | other | upstream | 309873 | 76484372 ~ 76485285 (-) |
| LOC110538302 | LOC106601359 | other | upstream | 654283 | 76828760 ~ 76844798 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| bowfin (Amia calva) | AMCG00014936 | NA | coding | CM030128.1 | CM030128.1 | 40188709 ~ 40206799 (+) |
