G1112175


Basic Information

Item Value
gene id G1112175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76215168 ~ 76279918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264467
ccttgatgacagctttgcaaactcttggcattctctcaaccagcttcatgaggtagtcacttggaatgcatgtcagttaacaggtgtgccttgttaaaagttaatttgtggaatttctttccttctttgagccaatcaattgtgttgtgacaaggtaggggtggtatacagaagatagccctatttggtaaaataccaagtccatattatggcaagaacaggtcaaataagcaaagagaaatgacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264467 True 247 lncRNA 0.40 2 76215168 76279918

Neighbor

gene id symbol gene type direction distance location
LOC110538964 LOC106601209 coding upstream 41998 76163989 ~ 76173170 (+)
LOC110538334 wbp2 coding upstream 96006 76113279 ~ 76119162 (+)
LOC110538965 zg14 coding upstream 108387 76104913 ~ 76106781 (+)
LOC110538336 LOC100380702 coding upstream 110188 76099381 ~ 76104980 (+)
LOC110538340 NA coding upstream 122184 76090108 ~ 76092984 (+)
LOC110538328 LOC106601207 coding downstream 22186 76302104 ~ 76327286 (+)
LOC118937910 NA coding downstream 70366 76350284 ~ 76350336 (+)
LOC110538327 LOC106601204 coding downstream 72990 76352908 ~ 76359278 (+)
LOC110538324 LOC106607100 coding downstream 100898 76380816 ~ 76419385 (+)
LOC100136171 LOC100136171 coding downstream 184824 76464742 ~ 76470326 (+)
G1112159 NA non-coding upstream 31993 76182822 ~ 76183175 (+)
G1112154 NA non-coding upstream 52930 76162023 ~ 76162238 (+)
G1112153 NA non-coding upstream 54697 76160135 ~ 76160471 (+)
G1112145 NA non-coding upstream 66948 76148010 ~ 76148220 (+)
G1112139 NA non-coding upstream 73512 76141352 ~ 76141656 (+)
LOC110538963 grin2b non-coding downstream 4848 76174135 ~ 76287434 (+)
G1112202 NA non-coding downstream 9101 76289019 ~ 76291042 (+)
G1112203 NA non-coding downstream 11878 76291796 ~ 76293584 (+)
G1112215 NA non-coding downstream 47964 76327882 ~ 76328257 (+)
G1111968 LOC106601158 other upstream 319295 75895612 ~ 75895873 (+)
LOC110538356 LOC106607146 other upstream 361456 75838066 ~ 75853712 (+)
LOC110538360 LOC104946491 other upstream 426877 75774976 ~ 75790602 (+)
G1111970 LOC106601177 other upstream 461575 75750870 ~ 75753593 (+)
G1111961 NA other upstream 469548 75745139 ~ 75745620 (+)
G1112079 NA other downstream 7680 76287598 ~ 76288502 (+)
G1112082 NA other downstream 20142 76300060 ~ 76300527 (+)
LOC110538313 LOC106601291 other downstream 450977 76730857 ~ 76732118 (+)
G1113861 LOC100136012 other downstream 1311803 77591721 ~ 77624996 (+)

Expression


Co-expression Network