G1112079


Basic Information

Item Value
gene id G1112079
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76287598 ~ 76288502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264365
gcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctaagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaggccggatttggatacaaaaagatttcccaagctttaaacatccaaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaacttttttgcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacatcatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatgggtaaaattgatgggaagatggatggagtcaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactggga

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264365 True 905 TUCP 0.44 1 76287598 76288502

Neighbor

gene id symbol gene type direction distance location
LOC110538963 grin2b coding upstream 1072 76174135 ~ 76287434 (+)
LOC110538964 LOC106601209 coding upstream 114428 76163989 ~ 76173170 (+)
LOC110538334 wbp2 coding upstream 168436 76113279 ~ 76119162 (+)
LOC110538965 zg14 coding upstream 180817 76104913 ~ 76106781 (+)
LOC110538336 LOC100380702 coding upstream 182618 76099381 ~ 76104980 (+)
LOC110538328 LOC106601207 coding downstream 13602 76302104 ~ 76327286 (+)
LOC118937910 NA coding downstream 61782 76350284 ~ 76350336 (+)
LOC110538327 LOC106601204 coding downstream 64406 76352908 ~ 76359278 (+)
LOC110538324 LOC106607100 coding downstream 92314 76380816 ~ 76419385 (+)
LOC100136171 LOC100136171 coding downstream 176240 76464742 ~ 76470326 (+)
G1112175 NA non-coding upstream 7680 76215168 ~ 76279918 (+)
G1112191 NA non-coding upstream 29089 76256103 ~ 76258509 (+)
G1112159 NA non-coding upstream 104423 76182822 ~ 76183175 (+)
G1112154 NA non-coding upstream 125360 76162023 ~ 76162238 (+)
G1112202 NA non-coding downstream 517 76289019 ~ 76291042 (+)
G1112203 NA non-coding downstream 3294 76291796 ~ 76293584 (+)
G1112215 NA non-coding downstream 39380 76327882 ~ 76328257 (+)
G1112211 NA non-coding downstream 51087 76339589 ~ 76341567 (+)
G1111968 LOC106601158 other upstream 391725 75895612 ~ 75895873 (+)
LOC110538356 LOC106607146 other upstream 433886 75838066 ~ 75853712 (+)
LOC110538360 LOC104946491 other upstream 499307 75774976 ~ 75790602 (+)
G1111970 LOC106601177 other upstream 534005 75750870 ~ 75753593 (+)
G1111961 NA other upstream 541978 75745139 ~ 75745620 (+)
G1112082 NA other downstream 11558 76300060 ~ 76300527 (+)
LOC110538313 LOC106601291 other downstream 442393 76730857 ~ 76732118 (+)
G1113861 LOC100136012 other downstream 1303219 77591721 ~ 77624996 (+)
G1113968 NA other downstream 1485716 77774218 ~ 77819621 (+)

Expression


Co-expression Network