G1112082


Basic Information

Item Value
gene id G1112082
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76300060 ~ 76300527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264368
catccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggatatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccatgtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaattgcaGTCTCTcgttgtgcaaaactgatagagacatacctcaagcgacttacagctgtaatcgcagcaaaaggtggcgc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264368 True 468 TUCP 0.44 1 76300060 76300527

Neighbor

gene id symbol gene type direction distance location
LOC110538963 grin2b coding upstream 13534 76174135 ~ 76287434 (+)
LOC110538964 LOC106601209 coding upstream 126890 76163989 ~ 76173170 (+)
LOC110538334 wbp2 coding upstream 180898 76113279 ~ 76119162 (+)
LOC110538965 zg14 coding upstream 193279 76104913 ~ 76106781 (+)
LOC110538336 LOC100380702 coding upstream 195080 76099381 ~ 76104980 (+)
LOC110538328 LOC106601207 coding downstream 1577 76302104 ~ 76327286 (+)
LOC118937910 NA coding downstream 49757 76350284 ~ 76350336 (+)
LOC110538327 LOC106601204 coding downstream 52381 76352908 ~ 76359278 (+)
LOC110538324 LOC106607100 coding downstream 80289 76380816 ~ 76419385 (+)
LOC100136171 LOC100136171 coding downstream 164215 76464742 ~ 76470326 (+)
G1112203 NA non-coding upstream 6476 76291796 ~ 76293584 (+)
G1112202 NA non-coding upstream 9018 76289019 ~ 76291042 (+)
G1112175 NA non-coding upstream 20142 76215168 ~ 76279918 (+)
G1112191 NA non-coding upstream 41551 76256103 ~ 76258509 (+)
G1112215 NA non-coding downstream 27355 76327882 ~ 76328257 (+)
G1112211 NA non-coding downstream 39062 76339589 ~ 76341567 (+)
G1112238 NA non-coding downstream 78626 76379153 ~ 76379379 (+)
G1112079 NA other upstream 11558 76287598 ~ 76288502 (+)
G1111968 LOC106601158 other upstream 404187 75895612 ~ 75895873 (+)
LOC110538356 LOC106607146 other upstream 446348 75838066 ~ 75853712 (+)
LOC110538360 LOC104946491 other upstream 511769 75774976 ~ 75790602 (+)
G1111970 LOC106601177 other upstream 546467 75750870 ~ 75753593 (+)
LOC110538313 LOC106601291 other downstream 430368 76730857 ~ 76732118 (+)
G1113861 LOC100136012 other downstream 1291194 77591721 ~ 77624996 (+)
G1113968 NA other downstream 1473691 77774218 ~ 77819621 (+)
LOC110538485 smarca4 other downstream 1544990 77845399 ~ 77864078 (+)

Expression


Co-expression Network