G1112215


Basic Information

Item Value
gene id G1112215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76327882 ~ 76328257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264544
caatccgttGCGCTGAAGATCCGCACTACAGcatgattgaaatgtaaaggcaatgttcctgtgttcacggagactgcattcacggtgaACACTGCATATGTCAGCTCAAATGGAAATTACCTtttttaaaggcccaatgcagccagaAATTGTACATTGCACAAGAAACGTATTTCTCTGAAATGTTTGGCACAACATGTTtacggggctcccgagtggtgtagcagtctaaggcactgcatctcagtgctagaggtgtcactacagaccctggttcgatttcaggctgtatcacaaacggccttgattgggagtcccatagggcggcacgcaattggcccagcgtggtctTGGATAGAATttgcccggggtaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264544 True 376 lncRNA 0.49 1 76327882 76328257

Neighbor

gene id symbol gene type direction distance location
LOC110538328 LOC106601207 coding upstream 596 76302104 ~ 76327286 (+)
LOC110538963 grin2b coding upstream 41356 76174135 ~ 76287434 (+)
LOC110538964 LOC106601209 coding upstream 154712 76163989 ~ 76173170 (+)
LOC110538334 wbp2 coding upstream 208720 76113279 ~ 76119162 (+)
LOC110538965 zg14 coding upstream 221101 76104913 ~ 76106781 (+)
LOC118937910 NA coding downstream 22027 76350284 ~ 76350336 (+)
LOC110538327 LOC106601204 coding downstream 24651 76352908 ~ 76359278 (+)
LOC110538324 LOC106607100 coding downstream 52559 76380816 ~ 76419385 (+)
LOC100136171 LOC100136171 coding downstream 136485 76464742 ~ 76470326 (+)
LOC118937824 bglap coding downstream 146555 76474812 ~ 76476439 (+)
G1112203 NA non-coding upstream 34298 76291796 ~ 76293584 (+)
G1112202 NA non-coding upstream 36840 76289019 ~ 76291042 (+)
G1112175 NA non-coding upstream 47964 76215168 ~ 76279918 (+)
G1112211 NA non-coding downstream 11332 76339589 ~ 76341567 (+)
G1112238 NA non-coding downstream 50896 76379153 ~ 76379379 (+)
G1112443 NA non-coding downstream 448827 76777084 ~ 76778163 (+)
G1112446 NA non-coding downstream 453948 76782205 ~ 76782587 (+)
G1112082 NA other upstream 27355 76300060 ~ 76300527 (+)
G1112079 NA other upstream 39380 76287598 ~ 76288502 (+)
G1111968 LOC106601158 other upstream 432009 75895612 ~ 75895873 (+)
LOC110538356 LOC106607146 other upstream 474170 75838066 ~ 75853712 (+)
LOC110538360 LOC104946491 other upstream 539591 75774976 ~ 75790602 (+)
LOC110538313 LOC106601291 other downstream 402638 76730857 ~ 76732118 (+)
G1113861 LOC100136012 other downstream 1263464 77591721 ~ 77624996 (+)
G1113968 NA other downstream 1445961 77774218 ~ 77819621 (+)
LOC110538485 smarca4 other downstream 1517260 77845399 ~ 77864078 (+)

Expression


Co-expression Network