G1113043 (LOC106601201)


Basic Information

Item Value
gene id G1113043
gene name LOC106601201
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76484372 ~ 76485285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1265503
AAACACCCCCTTTCTTTCTTTGAAATCCATCACGTTTCTCAGTTcaacaataaaataaacatttgacaGTCATAAAAAAACACTAGCTTTTTCACAAAGATTGAGCCAAATTATCATAGCCATGTACAGTAAGTTGGTAGGGAGGAGATTCTAGTCTCATTGTGAAAAACAAAGCCTTTCTGCTTCATTTAGAGGAACCAATGTGTTTCTGAACAGCATCTGCTTGATGGTATCACTAACACTTTCTTCATGGCCCCTACTGTTCATTCTTTCTCAACACACCCACCCCTTtcatctcttcttcctctcttttccatAGGCCCTCCTCCGCTCCCGGCCCCTTTATCTCTGCGCACCCTCAGCGCCGTGGGCACGAAGCGGGTGACCTCTGTCTTGGGGTTGATGATCTGGGGTTTGGCTGAGATGGTGGCTCCGCCACTCCCCTGGCCTGTTGCCAGATTGCTGCCTCCGGCTGAGATAGAGGTGATGTTGGCCCGCTTCTCGATGGTTGGTGCATGGTGGTGGCTGGTGGGGTTTGCGCCCGACGGCAGGGCACTTGTCCCCGGGGGAGGGGGCATCTGCATCCCTGGGCGCATGGACATAGGCATTGAGGGAGGGGGCAGCATGGAGGCATTGGGGTTGCTCTGGGAGCCATCCGGGTTGGAGCCGGGTTTCTGGCGGTGGACGATGCTGGGGGGAGCACTGAGGACGTTGGAGTTAAGCGGCGGGGGGaaaagagaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1265503 True 743 TUCP 0.53 2 76484372 76485285

Neighbor

gene id symbol gene type direction distance location
LOC110538323 NA coding downstream 5433 76428548 ~ 76478939 (-)
LOC110538326 LOC106601203 coding downstream 59207 76420120 ~ 76425165 (-)
LOC100135986 LOC100135986 coding downstream 108647 76361168 ~ 76375725 (-)
LOC110538329 LOC106601205 coding downstream 138187 76339580 ~ 76346185 (-)
LOC110538331 LOC106601211 coding downstream 348265 76126824 ~ 76136107 (-)
LOC110538317 LOC106591500 coding upstream 71637 76556922 ~ 76563120 (-)
nfixa LOC106601192 coding upstream 89003 76574288 ~ 76703398 (-)
LOC110538312 LOC106601368 coding upstream 249312 76734597 ~ 76747739 (-)
LOC110538311 tsn16 coding upstream 263979 76749264 ~ 76757927 (-)
LOC110539169 LOC107548868 coding upstream 272967 76758252 ~ 76759472 (-)
G1113005 NA non-coding downstream 14127 76388951 ~ 76470245 (-)
G1112992 NA non-coding downstream 107203 76376651 ~ 76377169 (-)
G1112982 NA non-coding downstream 148793 76335340 ~ 76335579 (-)
G1112969 NA non-coding downstream 184968 76299163 ~ 76299404 (-)
G1113104 NA non-coding upstream 101248 76586533 ~ 76636296 (-)
G1113130 NA non-coding upstream 145139 76630424 ~ 76630909 (-)
G1113184 NA non-coding upstream 245611 76730896 ~ 76731287 (-)
G1113198 NA non-coding upstream 299395 76784680 ~ 76784922 (-)
LOC110538308 epor non-coding upstream 301011 76786296 ~ 76793231 (-)
G1113013 NA other downstream 70161 76412940 ~ 76414211 (-)
G1112997 NA other downstream 102645 76380928 ~ 76381727 (-)
G1112697 LOC106607147 other downstream 687574 75796450 ~ 75796798 (-)
G1111672 NA other downstream 1293941 75190185 ~ 75190431 (-)
LOC110538302 LOC106601359 other upstream 343497 76828760 ~ 76844798 (-)
G1114604 LOC106607027 other upstream 996826 77482111 ~ 77484731 (-)
LOC110538477 LOC106607035 other upstream 1125560 77610820 ~ 77612826 (-)
G1114714 NA other upstream 1209210 77694495 ~ 77695275 (-)
LOC110539174 prdx2 other upstream 1219222 77704482 ~ 77719934 (-)

Expression


Co-expression Network