Gene
RNA
| Item | Value |
|---|---|
| gene id | G1112443 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 76777084 ~ 76778163 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 653-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1264803 | True | 1060 | lncRNA | 0.39 | 2 | 76777084 | 76778163 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538313 | LOC106601291 | coding | upstream | 44968 | 76730857 ~ 76732118 (+) |
| LOC110538316 | LOC106601193 | coding | upstream | 203176 | 76566094 ~ 76573908 (+) |
| LOC110538962 | LOC106601199 | coding | upstream | 222570 | 76489568 ~ 76554514 (+) |
| LOC110538319 | LOC106601200 | coding | upstream | 288319 | 76485644 ~ 76488765 (+) |
| LOC110538318 | LOC106601201 | coding | upstream | 291722 | 76478935 ~ 76485362 (+) |
| LOC110538307 | LOC106607087 | coding | downstream | 31285 | 76809448 ~ 76811868 (+) |
| LOC118936312 | LOC106589640 | coding | downstream | 34095 | 76812258 ~ 76815056 (+) |
| LOC110538300 | LOC106607082 | coding | downstream | 173114 | 76951277 ~ 76965157 (+) |
| LOC110538299 | LOC106601357 | coding | downstream | 190607 | 76968770 ~ 76972089 (+) |
| LOC110538297 | LOC106601356 | coding | downstream | 213757 | 76991920 ~ 76996271 (+) |
| LOC110538324 | LOC106607100 | non-coding | upstream | 357718 | 76380816 ~ 76419385 (+) |
| G1112238 | NA | non-coding | upstream | 397705 | 76379153 ~ 76379379 (+) |
| G1112211 | NA | non-coding | upstream | 435517 | 76339589 ~ 76341567 (+) |
| G1112215 | NA | non-coding | upstream | 448827 | 76327882 ~ 76328257 (+) |
| LOC110538328 | LOC106601207 | non-coding | upstream | 462143 | 76302104 ~ 76327286 (+) |
| G1112446 | NA | non-coding | downstream | 4042 | 76782205 ~ 76782587 (+) |
| G1112431 | NA | non-coding | downstream | 28846 | 76807009 ~ 76836306 (+) |
| G1112464 | LOC106601359 | non-coding | downstream | 50577 | 76828740 ~ 76832369 (+) |
| G1113244 | NA | non-coding | downstream | 95202 | 76873365 ~ 76873592 (+) |
| LOC100136171 | LOC100136171 | other | upstream | 306857 | 76464742 ~ 76470326 (+) |
| G1112082 | NA | other | upstream | 476557 | 76300060 ~ 76300527 (+) |
| G1112079 | NA | other | upstream | 488582 | 76287598 ~ 76288502 (+) |
| G1111968 | LOC106601158 | other | upstream | 881211 | 75895612 ~ 75895873 (+) |
| G1113861 | LOC100136012 | other | downstream | 813558 | 77591721 ~ 77624996 (+) |
| G1113968 | NA | other | downstream | 996055 | 77774218 ~ 77819621 (+) |
| LOC110538485 | smarca4 | other | downstream | 1067354 | 77845399 ~ 77864078 (+) |
| LOC110486564 | LOC106601427 | other | downstream | 2271842 | 79049969 ~ 79053051 (+) |
| G1115550 | LOC106601417 | other | downstream | 2296503 | 79074666 ~ 79077216 (+) |
