G1113284


Basic Information

Item Value
gene id G1113284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 76926756 ~ 76927123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1265811
ttgtctctggccccctcccagttagggggagtgatgagctctacagcagagtctcacaactcaatcgctggttgaaaactgttttctgcccctcccaaaagatagaatttgtagataattggccctctttctgggactcacccacaaacaggaccaagcctgacctgctgaggagtgacggactccatcctagctggaggggtgctctcatcttatctaccaacatagacagggctctaactcctctagctccacaatgaaatagggtgcaggccaggcagcaggctgttagccagcctgccagcatagtggagtctgccactagcacagtcagtgtagtcagctcagctatccccattgagaccgtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1265811 True 368 lncRNA 0.53 1 76926756 76927123

Neighbor

gene id symbol gene type direction distance location
LOC118936312 LOC106589640 coding upstream 112032 76812258 ~ 76815056 (+)
LOC110538307 LOC106607087 coding upstream 114888 76809448 ~ 76811868 (+)
LOC110538313 LOC106601291 coding upstream 194640 76730857 ~ 76732118 (+)
LOC110538316 LOC106601193 coding upstream 352848 76566094 ~ 76573908 (+)
LOC110538962 LOC106601199 coding upstream 372242 76489568 ~ 76554514 (+)
LOC110538300 LOC106607082 coding downstream 24154 76951277 ~ 76965157 (+)
LOC110538299 LOC106601357 coding downstream 41647 76968770 ~ 76972089 (+)
LOC110538297 LOC106601356 coding downstream 64797 76991920 ~ 76996271 (+)
nfil3-2 LOC106607079 coding downstream 73837 77000960 ~ 77012928 (+)
LOC118937747 NA coding downstream 143749 77070872 ~ 77078590 (+)
G1113247 NA non-coding upstream 47004 76875912 ~ 76879752 (+)
G1113244 NA non-coding upstream 53164 76873365 ~ 76873592 (+)
G1112431 NA non-coding upstream 90450 76807009 ~ 76836306 (+)
G1112464 LOC106601359 non-coding upstream 94387 76828740 ~ 76832369 (+)
G1113270 NA non-coding downstream 49211 76976334 ~ 76978898 (+)
G1113381 NA non-coding downstream 183684 77110807 ~ 77111076 (+)
G1113407 LOC106601347 non-coding downstream 240268 77167391 ~ 77171690 (+)
G1113639 NA non-coding downstream 294238 77221361 ~ 77221625 (+)
G1113647 NA non-coding downstream 300852 77227975 ~ 77228653 (+)
LOC100136171 LOC100136171 other upstream 456529 76464742 ~ 76470326 (+)
G1112082 NA other upstream 626229 76300060 ~ 76300527 (+)
G1112079 NA other upstream 638254 76287598 ~ 76288502 (+)
G1111968 LOC106601158 other upstream 1030883 75895612 ~ 75895873 (+)
G1113861 LOC100136012 other downstream 664598 77591721 ~ 77624996 (+)
G1113968 NA other downstream 847095 77774218 ~ 77819621 (+)
LOC110538485 smarca4 other downstream 918394 77845399 ~ 77864078 (+)
LOC110486564 LOC106601427 other downstream 2122882 79049969 ~ 79053051 (+)
G1115550 LOC106601417 other downstream 2147543 79074666 ~ 79077216 (+)

Expression


Co-expression Network