G1113381


Basic Information

Item Value
gene id G1113381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 77110807 ~ 77111076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1265911
ttcacttttactttacattcctaaagaaaatattgtattttttaatccatacatagggcggcgcacaattggcccagcttcgtccacGTTTGGCTGGtataggttgtcattgtaaataagaagttgttcttaactggctaaaatgcaacaacaacaaaaaatccctgacacccaaaaataCTCCTTATATTTTGAATGCTTGGCAGGACAAGATGTTCCAATTCActctgatctggagaactcactaaacCCCAAtgctggagtgtgccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1265911 True 270 lncRNA 0.39 1 77110807 77111076

Neighbor

gene id symbol gene type direction distance location
LOC118937747 NA coding upstream 32217 77070872 ~ 77078590 (+)
nfil3-2 LOC106607079 coding upstream 97879 77000960 ~ 77012928 (+)
LOC110538297 LOC106601356 coding upstream 114536 76991920 ~ 76996271 (+)
LOC110538299 LOC106601357 coding upstream 138718 76968770 ~ 76972089 (+)
LOC110538300 LOC106607082 coding upstream 145650 76951277 ~ 76965157 (+)
LOC110538293 LOC106601351 coding downstream 968 77112044 ~ 77120816 (+)
LOC110538287 LOC106601346 coding downstream 187429 77298505 ~ 77301052 (+)
LOC110538285 LOC106601344 coding downstream 190134 77301210 ~ 77315227 (+)
LOC110538960 LOC106607023 coding downstream 209133 77320209 ~ 77354182 (+)
LOC110538283 LOC106607024 coding downstream 251996 77363072 ~ 77420925 (+)
G1113270 NA non-coding upstream 131909 76976334 ~ 76978898 (+)
G1113284 NA non-coding upstream 183684 76926756 ~ 76927123 (+)
G1113247 NA non-coding upstream 231055 76875912 ~ 76879752 (+)
G1113244 NA non-coding upstream 237215 76873365 ~ 76873592 (+)
G1112464 LOC106601359 non-coding upstream 278438 76828740 ~ 76832369 (+)
G1113407 LOC106601347 non-coding downstream 56315 77167391 ~ 77171690 (+)
G1113639 NA non-coding downstream 110285 77221361 ~ 77221625 (+)
G1113647 NA non-coding downstream 116899 77227975 ~ 77228653 (+)
G1113807 NA non-coding downstream 355842 77466918 ~ 77467150 (+)
LOC110538313 LOC106601291 other upstream 378689 76730857 ~ 76732118 (+)
LOC100136171 LOC100136171 other upstream 640580 76464742 ~ 76470326 (+)
G1112082 NA other upstream 810280 76300060 ~ 76300527 (+)
G1112079 NA other upstream 822305 76287598 ~ 76288502 (+)
G1111968 LOC106601158 other upstream 1214934 75895612 ~ 75895873 (+)
G1113861 LOC100136012 other downstream 480645 77591721 ~ 77624996 (+)
G1113968 NA other downstream 663142 77774218 ~ 77819621 (+)
LOC110538485 smarca4 other downstream 734441 77845399 ~ 77864078 (+)
LOC110486564 LOC106601427 other downstream 1938929 79049969 ~ 79053051 (+)
G1115550 LOC106601417 other downstream 1963590 79074666 ~ 79077216 (+)

Expression


Co-expression Network