Gene
RNA
| Item | Value |
|---|---|
| gene id | G1113647 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 77227975 ~ 77228653 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1266222 | True | 679 | lncRNA | 0.49 | 1 | 77227975 | 77228653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538293 | LOC106601351 | coding | upstream | 107159 | 77112044 ~ 77120816 (+) |
| LOC118937747 | NA | coding | upstream | 149385 | 77070872 ~ 77078590 (+) |
| nfil3-2 | LOC106607079 | coding | upstream | 215047 | 77000960 ~ 77012928 (+) |
| LOC110538297 | LOC106601356 | coding | upstream | 231704 | 76991920 ~ 76996271 (+) |
| LOC110538299 | LOC106601357 | coding | upstream | 255886 | 76968770 ~ 76972089 (+) |
| LOC110538287 | LOC106601346 | coding | downstream | 69852 | 77298505 ~ 77301052 (+) |
| LOC110538285 | LOC106601344 | coding | downstream | 72557 | 77301210 ~ 77315227 (+) |
| LOC110538960 | LOC106607023 | coding | downstream | 91556 | 77320209 ~ 77354182 (+) |
| LOC110538283 | LOC106607024 | coding | downstream | 134419 | 77363072 ~ 77420925 (+) |
| LOC110538464 | LOC106607025 | coding | downstream | 203929 | 77432582 ~ 77445522 (+) |
| G1113639 | NA | non-coding | upstream | 6350 | 77221361 ~ 77221625 (+) |
| G1113407 | LOC106601347 | non-coding | upstream | 56285 | 77167391 ~ 77171690 (+) |
| G1113381 | NA | non-coding | upstream | 116899 | 77110807 ~ 77111076 (+) |
| G1113270 | NA | non-coding | upstream | 249077 | 76976334 ~ 76978898 (+) |
| G1113284 | NA | non-coding | upstream | 300852 | 76926756 ~ 76927123 (+) |
| G1113807 | NA | non-coding | downstream | 238265 | 77466918 ~ 77467150 (+) |
| G1113808 | NA | non-coding | downstream | 238806 | 77467459 ~ 77468076 (+) |
| si:ch211-106h11.1 | LOC106607027 | non-coding | downstream | 254418 | 77478905 ~ 77484829 (+) |
| G1113739 | LOC106607028 | non-coding | downstream | 264988 | 77493641 ~ 77496003 (+) |
| LOC110538313 | LOC106601291 | other | upstream | 495857 | 76730857 ~ 76732118 (+) |
| LOC100136171 | LOC100136171 | other | upstream | 757748 | 76464742 ~ 76470326 (+) |
| G1112082 | NA | other | upstream | 927448 | 76300060 ~ 76300527 (+) |
| G1112079 | NA | other | upstream | 939473 | 76287598 ~ 76288502 (+) |
| G1111968 | LOC106601158 | other | upstream | 1332102 | 75895612 ~ 75895873 (+) |
| G1113861 | LOC100136012 | other | downstream | 363068 | 77591721 ~ 77624996 (+) |
| G1113968 | NA | other | downstream | 545565 | 77774218 ~ 77819621 (+) |
| LOC110538485 | smarca4 | other | downstream | 616864 | 77845399 ~ 77864078 (+) |
| LOC110486564 | LOC106601427 | other | downstream | 1821352 | 79049969 ~ 79053051 (+) |
| G1115550 | LOC106601417 | other | downstream | 1846013 | 79074666 ~ 79077216 (+) |
