Gene
RNA
| Item | Value |
|---|---|
| gene id | G1113665 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 77240118 ~ 77240320 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1266241 | True | 203 | lncRNA | 0.41 | 1 | 77240118 | 77240320 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538288 | LOC106607073 | coding | downstream | 45771 | 77169823 ~ 77194374 (-) |
| LOC110538289 | LOC106601349 | coding | downstream | 73467 | 77147190 ~ 77166651 (-) |
| LOC110538291 | LOC106601350 | coding | downstream | 97918 | 77131049 ~ 77142200 (-) |
| syce2 | LOC106601352 | coding | downstream | 117086 | 77121547 ~ 77123032 (-) |
| LOC110538294 | LOC106601353 | coding | downstream | 130599 | 77084949 ~ 77109519 (-) |
| si:ch211-194b1.1 | LOC106601342 | coding | upstream | 30313 | 77270633 ~ 77289586 (-) |
| pglyrp6 | LOC106601345 | coding | upstream | 50110 | 77290430 ~ 77302205 (-) |
| LOC110538465 | LOC106607026 | coding | upstream | 205204 | 77445524 ~ 77450347 (-) |
| LOC110539172 | LOC106607008 | coding | upstream | 229537 | 77469857 ~ 77478487 (-) |
| LOC110538468 | LOC106601163 | coding | upstream | 253273 | 77493593 ~ 77501440 (-) |
| G1113649 | NA | non-coding | downstream | 10711 | 77229114 ~ 77229407 (-) |
| G1113637 | NA | non-coding | downstream | 21007 | 77218879 ~ 77219111 (-) |
| G1113635 | NA | non-coding | downstream | 23419 | 77216171 ~ 77216699 (-) |
| G1113515 | NA | non-coding | downstream | 111172 | 77128547 ~ 77128946 (-) |
| G1113682 | NA | non-coding | upstream | 6533 | 77246853 ~ 77250827 (-) |
| G1113686 | NA | non-coding | upstream | 11230 | 77251550 ~ 77251772 (-) |
| G1113687 | NA | non-coding | upstream | 11618 | 77251938 ~ 77252161 (-) |
| G1114503 | NA | non-coding | upstream | 56626 | 77296946 ~ 77297374 (-) |
| G1114531 | LOC106601339 | non-coding | upstream | 149705 | 77390025 ~ 77445496 (-) |
| LOC110538302 | LOC106601359 | other | downstream | 404835 | 76828760 ~ 76844798 (-) |
| G1113043 | LOC106601201 | other | downstream | 754833 | 76484372 ~ 76485285 (-) |
| LOC110538323 | NA | other | downstream | 806548 | 76428548 ~ 76478939 (-) |
| G1113013 | NA | other | downstream | 825907 | 76412940 ~ 76414211 (-) |
| G1112997 | NA | other | downstream | 858391 | 76380928 ~ 76381727 (-) |
| G1114604 | LOC106607027 | other | upstream | 241791 | 77482111 ~ 77484731 (-) |
| LOC110538477 | LOC106607035 | other | upstream | 370525 | 77610820 ~ 77612826 (-) |
| G1114714 | NA | other | upstream | 454175 | 77694495 ~ 77695275 (-) |
| LOC110539174 | prdx2 | other | upstream | 464187 | 77704482 ~ 77719934 (-) |
| G1114809 | smarca4 | other | upstream | 618542 | 77858862 ~ 77862506 (-) |
