G1113687



Basic Information


Item Value
gene id G1113687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 77251938 ~ 77252161 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1266264
ttccggtacagctggtgatctcatgcatgtttcagtgtagctcgtccggtaggcttgtgtcactgggcagctctcggctgtgcttccctttgtagtctgtaatggtttgcaggccccgccacatccgacgagcgtcagagctggtgtagtacaaCTTGCTCTTAGTTCtgcattgacgctttgcctgtttgatggttcgtctgagggcatagtgggatttcata

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1266264 True 224 lncRNA 0.52 1 77251938 77252161
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110538288 LOC106607073 coding downstream 57591 77169823 ~ 77194374 (-)
LOC110538289 LOC106601349 coding downstream 85287 77147190 ~ 77166651 (-)
LOC110538291 LOC106601350 coding downstream 109738 77131049 ~ 77142200 (-)
syce2 LOC106601352 coding downstream 128906 77121547 ~ 77123032 (-)
LOC110538294 LOC106601353 coding downstream 142419 77084949 ~ 77109519 (-)
si:ch211-194b1.1 LOC106601342 coding upstream 18472 77270633 ~ 77289586 (-)
pglyrp6 LOC106601345 coding upstream 38269 77290430 ~ 77302205 (-)
LOC110538465 LOC106607026 coding upstream 193363 77445524 ~ 77450347 (-)
LOC110539172 LOC106607008 coding upstream 217696 77469857 ~ 77478487 (-)
LOC110538468 LOC106601163 coding upstream 241432 77493593 ~ 77501440 (-)
G1113686 NA non-coding downstream 166 77251550 ~ 77251772 (-)
G1113682 NA non-coding downstream 1111 77246853 ~ 77250827 (-)
G1113665 NA non-coding downstream 11618 77240118 ~ 77240320 (-)
G1113649 NA non-coding downstream 22531 77229114 ~ 77229407 (-)
G1113637 NA non-coding downstream 32827 77218879 ~ 77219111 (-)
G1114503 NA non-coding upstream 44785 77296946 ~ 77297374 (-)
G1114531 LOC106601339 non-coding upstream 137864 77390025 ~ 77445496 (-)
G1114537 NA non-coding upstream 146007 77398168 ~ 77418890 (-)
G1114536 NA non-coding upstream 151039 77403200 ~ 77439929 (-)
G1114603 LOC106607027 non-coding upstream 229007 77481168 ~ 77481478 (-)
LOC110538302 LOC106601359 other downstream 416655 76828760 ~ 76844798 (-)
G1113043 LOC106601201 other downstream 766653 76484372 ~ 76485285 (-)
LOC110538323 NA other downstream 818368 76428548 ~ 76478939 (-)
G1113013 NA other downstream 837727 76412940 ~ 76414211 (-)
G1112997 NA other downstream 870211 76380928 ~ 76381727 (-)
G1114604 LOC106607027 other upstream 229950 77482111 ~ 77484731 (-)
LOC110538477 LOC106607035 other upstream 358684 77610820 ~ 77612826 (-)
G1114714 NA other upstream 442334 77694495 ~ 77695275 (-)
LOC110539174 prdx2 other upstream 452346 77704482 ~ 77719934 (-)
G1114809 smarca4 other upstream 606701 77858862 ~ 77862506 (-)

Expression


G1113687 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
End of interactive chart.

G1113687 Expression in each Bioproject

Bar chart with 17 bars.
G1113687 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network