Gene
RNA
| Item | Value |
|---|---|
| gene id | G1114609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 77497995 ~ 77498221 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1267372 | True | 227 | lncRNA | 0.40 | 1 | 77497995 | 77498221 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539172 | LOC106607008 | coding | downstream | 19508 | 77469857 ~ 77478487 (-) |
| LOC110538465 | LOC106607026 | coding | downstream | 47648 | 77445524 ~ 77450347 (-) |
| pglyrp6 | LOC106601345 | coding | downstream | 195790 | 77290430 ~ 77302205 (-) |
| si:ch211-194b1.1 | LOC106601342 | coding | downstream | 208409 | 77270633 ~ 77289586 (-) |
| LOC110538288 | LOC106607073 | coding | downstream | 303648 | 77169823 ~ 77194374 (-) |
| LOC110538477 | LOC106607035 | coding | upstream | 112599 | 77610820 ~ 77612826 (-) |
| LOC110538478 | LOC106607036 | coding | upstream | 135546 | 77633767 ~ 77649740 (-) |
| LOC110539174 | prdx2 | coding | upstream | 206261 | 77704482 ~ 77719934 (-) |
| LOC110538481 | LOC106607039 | coding | upstream | 221489 | 77719710 ~ 77727698 (-) |
| LOC110538484 | LOC106607044 | coding | upstream | 328318 | 77826539 ~ 77829451 (-) |
| G1114606 | NA | non-coding | downstream | 5210 | 77492615 ~ 77492785 (-) |
| G1114605 | ddx39b | non-coding | downstream | 10529 | 77486442 ~ 77487466 (-) |
| G1114604 | LOC106607027 | non-coding | downstream | 13264 | 77482111 ~ 77484731 (-) |
| G1114603 | LOC106607027 | non-coding | downstream | 16517 | 77481168 ~ 77481478 (-) |
| G1114536 | NA | non-coding | downstream | 58066 | 77403200 ~ 77439929 (-) |
| G1114628 | NA | non-coding | upstream | 62634 | 77560855 ~ 77562870 (-) |
| G1114647 | NA | non-coding | upstream | 72523 | 77570744 ~ 77571225 (-) |
| G1114649 | NA | non-coding | upstream | 73699 | 77571920 ~ 77572855 (-) |
| G1114648 | rssa | non-coding | upstream | 77375 | 77575596 ~ 77576241 (-) |
| LOC110538302 | LOC106601359 | other | downstream | 662712 | 76828760 ~ 76844798 (-) |
| G1113043 | LOC106601201 | other | downstream | 1012710 | 76484372 ~ 76485285 (-) |
| LOC110538323 | NA | other | downstream | 1064425 | 76428548 ~ 76478939 (-) |
| G1113013 | NA | other | downstream | 1083784 | 76412940 ~ 76414211 (-) |
| G1114714 | NA | other | upstream | 196274 | 77694495 ~ 77695275 (-) |
| G1114809 | smarca4 | other | upstream | 360641 | 77858862 ~ 77862506 (-) |
| LOC110538491 | il-8 | other | upstream | 468600 | 77966821 ~ 77984741 (-) |
