G1114647


Basic Information

Item Value
gene id G1114647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 77570744 ~ 77571225 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1267412
atacaatacaacatgatccagcctaaaaaaaAGCATTTACACCCCTCTGTAACAAGTCTCCCATATTTTAAattcattcagtggcactaacatatctagatgaagcatggattgtagattATTCCATGCGTCTGGTGCACAagaagagaaggcagtcttgcctaatactgtgaatgtcctggggactttaagtagcaaccacctaggTATTCTCCACAGCAAGTTTACACACATATGTCATCTATGACCTCAAACTTCTAATCTGTGTCAAACTCACTTCATATGTCAGTGTACCCTATCTAACTTTGAAAGCAAAGGCCACTGTGACACATGCACACTGCAGTCCTTGATATAAGGTTTCTGATGAGAATAGCTGATTGCGTTGGAACTGGGTGTCATGTCATTAAGCTAAAAAAAATACCCACAAAGTTGCACAAGTTTCCAATAGGTTAGCAGTGTTTGTTTTACGTAATGAGTTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1267412 True 482 lncRNA 0.39 1 77570744 77571225

Neighbor

gene id symbol gene type direction distance location
LOC110538468 LOC106601163 coding downstream 69304 77493593 ~ 77501440 (-)
LOC110539172 LOC106607008 coding downstream 92257 77469857 ~ 77478487 (-)
LOC110538465 LOC106607026 coding downstream 120397 77445524 ~ 77450347 (-)
pglyrp6 LOC106601345 coding downstream 268539 77290430 ~ 77302205 (-)
si:ch211-194b1.1 LOC106601342 coding downstream 281158 77270633 ~ 77289586 (-)
LOC110538477 LOC106607035 coding upstream 39595 77610820 ~ 77612826 (-)
LOC110538478 LOC106607036 coding upstream 62542 77633767 ~ 77649740 (-)
LOC110539174 prdx2 coding upstream 133257 77704482 ~ 77719934 (-)
LOC110538481 LOC106607039 coding upstream 148485 77719710 ~ 77727698 (-)
LOC110538484 LOC106607044 coding upstream 255314 77826539 ~ 77829451 (-)
G1114628 NA non-coding downstream 7874 77560855 ~ 77562870 (-)
G1114609 NA non-coding downstream 72523 77497995 ~ 77498221 (-)
G1114606 NA non-coding downstream 77959 77492615 ~ 77492785 (-)
G1114605 ddx39b non-coding downstream 83278 77486442 ~ 77487466 (-)
G1114649 NA non-coding upstream 695 77571920 ~ 77572855 (-)
G1114648 rssa non-coding upstream 4371 77575596 ~ 77576241 (-)
G1114691 NA non-coding upstream 92523 77663748 ~ 77663966 (-)
G1114693 NA non-coding upstream 94429 77665654 ~ 77665882 (-)
G1114604 LOC106607027 other downstream 88232 77482111 ~ 77484731 (-)
LOC110538302 LOC106601359 other downstream 735461 76828760 ~ 76844798 (-)
G1113043 LOC106601201 other downstream 1085459 76484372 ~ 76485285 (-)
LOC110538323 NA other downstream 1137174 76428548 ~ 76478939 (-)
G1113013 NA other downstream 1156533 76412940 ~ 76414211 (-)
G1114714 NA other upstream 123270 77694495 ~ 77695275 (-)
G1114809 smarca4 other upstream 287637 77858862 ~ 77862506 (-)
LOC110538491 il-8 other upstream 395596 77966821 ~ 77984741 (-)

Expression


Co-expression Network