G1113861 (LOC100136012)


Basic Information

Item Value
gene id G1113861
gene name LOC100136012
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 77591721 ~ 77624996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1266483
aaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcaagacataagtatttgatcacctaccaaccagtaagaattccggctctcacagacctgttagtttttctttaagaagccctcctgttctccactccacctgtattaactgcacctgtttgaactcgttacctgtataaaagacacctgtccacacactcaatcaaacagacgccaacctctccacaatggccaagatcagagagctgtgtaaggacatcagggaaaaaattgtagacctgcacagggCTGGggtgggctacaggacaataggcaagcagcttggtgagaaggcaacaactgttggcgcaattattagaaaatggaagaagttcaagatgacggtcaatcaccctcggtctggggcgccatgcaagatctcacctcgtggggcatcaatgatcgtgaggaaggtgagggatcagcccagaactacacggcaggacctggtcaatgacctgaaaagagctgggaccacagtctcaaagaaaaccattagtaacacactacgccatcatggattaaaatcctgcaacgcac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1266483 True 594 TUCP 0.45 2 77591721 77624996

Neighbor

gene id symbol gene type direction distance location
LOC110538474 LOC106607032 coding upstream 14379 77571939 ~ 77577342 (+)
LOC110538473 LOC106601335 coding upstream 21833 77563191 ~ 77569888 (+)
LOC110538472 LOC100380669 coding upstream 28848 77526319 ~ 77562873 (+)
LOC110538471 LOC106601338 coding upstream 73131 77512174 ~ 77518590 (+)
LOC110538469 ddx39 coding upstream 99314 77485338 ~ 77492407 (+)
LOC110538479 LOC106607037 coding downstream 73868 77698864 ~ 77700714 (+)
LOC110538482 LOC106601329 coding downstream 127211 77752207 ~ 77816251 (+)
LOC110538483 LOC106607042 coding downstream 191569 77816565 ~ 77826107 (+)
LOC110538974 LOC106601309 coding downstream 206662 77831658 ~ 77848206 (+)
LOC110538485 smarca4 coding downstream 220403 77845399 ~ 77864078 (+)
G1113819 NA non-coding upstream 12462 77578968 ~ 77579259 (+)
G1113743 NA non-coding upstream 68489 77522967 ~ 77523232 (+)
G1113823 NA non-coding upstream 90166 77501132 ~ 77501555 (+)
G1113822 LOC106601311 non-coding upstream 91608 77499669 ~ 77500113 (+)
G1113821 LOC108236100 non-coding upstream 92413 77498830 ~ 77499308 (+)
G1113887 NA non-coding downstream 18191 77643187 ~ 77660154 (+)
G1113901 NA non-coding downstream 36371 77661367 ~ 77661591 (+)
G1113904 NA non-coding downstream 43270 77668266 ~ 77668474 (+)
G1113910 NA non-coding downstream 51512 77676508 ~ 77676736 (+)
G1113918 NA non-coding downstream 62425 77687421 ~ 77687628 (+)
LOC110538313 LOC106601291 other upstream 859603 76730857 ~ 76732118 (+)
LOC100136171 LOC100136171 other upstream 1121494 76464742 ~ 76470326 (+)
G1112082 NA other upstream 1291194 76300060 ~ 76300527 (+)
G1112079 NA other upstream 1303219 76287598 ~ 76288502 (+)
G1111968 LOC106601158 other upstream 1695848 75895612 ~ 75895873 (+)
G1113968 NA other downstream 149222 77774218 ~ 77819621 (+)
LOC110486564 LOC106601427 other downstream 1425009 79049969 ~ 79053051 (+)
G1115550 LOC106601417 other downstream 1449670 79074666 ~ 79077216 (+)
slc9a3r1b LOC106601421 other downstream 1567020 79161938 ~ 79196532 (+)

Expression


Co-expression Network