Gene
RNA
| Item | Value |
|---|---|
| gene id | G1114796 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 77836493 ~ 77836799 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transcription activator BRG1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1267578 | True | 307 | lncRNA | 0.44 | 1 | 77836493 | 77836799 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538484 | LOC106607044 | coding | downstream | 7042 | 77826539 ~ 77829451 (-) |
| LOC110538481 | LOC106607039 | coding | downstream | 108795 | 77719710 ~ 77727698 (-) |
| LOC110539174 | prdx2 | coding | downstream | 116559 | 77704482 ~ 77719934 (-) |
| LOC110538478 | LOC106607036 | coding | downstream | 186753 | 77633767 ~ 77649740 (-) |
| LOC110538477 | LOC106607035 | coding | downstream | 223667 | 77610820 ~ 77612826 (-) |
| LOC110538489 | LOC106601325 | coding | upstream | 62722 | 77899521 ~ 77904255 (-) |
| LOC110538491 | il-8 | coding | upstream | 130063 | 77966821 ~ 77984741 (-) |
| LOC110538494 | LOC106607051 | coding | upstream | 183026 | 78019825 ~ 78022664 (-) |
| hmgxb4a | LOC106601319 | coding | upstream | 190125 | 78026924 ~ 78033369 (-) |
| LOC110538496 | LOC106601323 | coding | upstream | 196776 | 78033575 ~ 78036134 (-) |
| G1114795 | NA | non-coding | downstream | 57 | 77835481 ~ 77836436 (-) |
| G1114794 | NA | non-coding | downstream | 2951 | 77833161 ~ 77833542 (-) |
| G1114793 | NA | non-coding | downstream | 3905 | 77831937 ~ 77832588 (-) |
| G1114791 | NA | non-coding | downstream | 6205 | 77829993 ~ 77830288 (-) |
| G1114762 | NA | non-coding | downstream | 16978 | 77774224 ~ 77819515 (-) |
| G1114797 | LOC106601309 | non-coding | upstream | 1165 | 77837964 ~ 77838352 (-) |
| G1114801 | NA | non-coding | upstream | 8646 | 77845445 ~ 77848986 (-) |
| G1114667 | NA | non-coding | upstream | 47447 | 77884246 ~ 77886356 (-) |
| G1114831 | LOC100286593 | non-coding | upstream | 57773 | 77894572 ~ 77895393 (-) |
| G1114847 | NA | non-coding | upstream | 97117 | 77933916 ~ 77934157 (-) |
| G1114714 | NA | other | downstream | 141218 | 77694495 ~ 77695275 (-) |
| G1114604 | LOC106607027 | other | downstream | 353981 | 77482111 ~ 77484731 (-) |
| LOC110538302 | LOC106601359 | other | downstream | 1001210 | 76828760 ~ 76844798 (-) |
| G1114809 | smarca4 | other | upstream | 22063 | 77858862 ~ 77862506 (-) |
| G1116006 | NA | other | upstream | 1380752 | 79217551 ~ 79218123 (-) |
| G1116120 | NA | other | upstream | 1617331 | 79454130 ~ 79454620 (-) |
| LOC110538563 | LOC106580481 | other | upstream | 2363708 | 80200038 ~ 80201563 (-) |
