G1114177


Basic Information

Item Value
gene id G1114177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 78179425 ~ 78179653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1266853
ttgtagggaggtcatacaggcacgtggaggccacacacactactgagcctcatttagacttgttttaaggacattacatcaaagttggatcagcctgtagtgtggttttccactttaattttgagtgtgactccaaatccagacctccatgggttgataaatttgatttccattgataatttttgtgtggttttgttgtcagcacattcaactatgtaaagaaaaaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1266853 True 229 lncRNA 0.39 1 78179425 78179653

Neighbor

gene id symbol gene type direction distance location
LOC110538506 LOC106601316 coding upstream 6511 78127633 ~ 78172914 (+)
LOC110538500 LOC106607056 coding upstream 130396 78046893 ~ 78049029 (+)
LOC110538493 LOC106601372 coding upstream 176879 77998427 ~ 78002546 (+)
LOC110538490 LOC106607046 coding upstream 281077 77895449 ~ 77898348 (+)
LOC110538488 LOC106601324 coding upstream 283988 77890043 ~ 77895437 (+)
LOC110538975 NA coding downstream 23895 78203548 ~ 78208995 (+)
LOC110538507 LOC106601383 coding downstream 45117 78224770 ~ 78319145 (+)
LOC110538508 grb2 coding downstream 153215 78332868 ~ 78384166 (+)
LOC110538976 LOC106601392 coding downstream 210282 78389935 ~ 78414270 (+)
LOC110538509 LOC106607066 coding downstream 238276 78417929 ~ 78421199 (+)
G1114137 NA non-coding upstream 63915 78110064 ~ 78115510 (+)
G1114132 NA non-coding upstream 82098 78095134 ~ 78097327 (+)
G1114133 NA non-coding upstream 85368 78093215 ~ 78094057 (+)
G1114119 NA non-coding upstream 108514 78070659 ~ 78070911 (+)
G1114179 NA non-coding downstream 1357 78181010 ~ 78181209 (+)
G1114227 NA non-coding downstream 82028 78261681 ~ 78262030 (+)
G1114248 NA non-coding downstream 124276 78303929 ~ 78304385 (+)
G1114257 NA non-coding downstream 151108 78330761 ~ 78331079 (+)
G1114261 NA non-coding downstream 184462 78364115 ~ 78385010 (+)
LOC110538485 smarca4 other upstream 328620 77845399 ~ 77864078 (+)
G1113968 NA other upstream 359804 77774218 ~ 77819621 (+)
G1113861 LOC100136012 other upstream 554429 77591721 ~ 77624996 (+)
LOC110538313 LOC106601291 other upstream 1447307 76730857 ~ 76732118 (+)
LOC100136171 LOC100136171 other upstream 1709198 76464742 ~ 76470326 (+)
LOC110486564 LOC106601427 other downstream 870352 79049969 ~ 79053051 (+)
G1115550 LOC106601417 other downstream 895013 79074666 ~ 79077216 (+)
slc9a3r1b LOC106601421 other downstream 1012363 79161938 ~ 79196532 (+)
G1115610 NA other downstream 1023687 79203340 ~ 79204836 (+)
G1115707 NA other downstream 1197013 79376666 ~ 79377080 (+)

Expression


Co-expression Network